DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31926 and AT5G24820

DIOPT Version :9

Sequence 1:NP_001259870.1 Gene:CG31926 / 326174 FlyBaseID:FBgn0051926 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_568459.1 Gene:AT5G24820 / 832551 AraportID:AT5G24820 Length:407 Species:Arabidopsis thaliana


Alignment Length:410 Identity:79/410 - (19%)
Similarity:148/410 - (36%) Gaps:119/410 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NHFKLLLFWLTVLAVLAFEAEARKRVRIGLHKNPEPIEENIKNELKT---LSIKHNLNVDDT-KA 66
            |...||:..|.:..||...:.               :|:::.|::..   |..:.||.|:.| ..
plant     5 NSLFLLVLLLLLFTVLTHNSS---------------LEDDLPNDIPNGFFLPFESNLYVEITIGT 54

  Fly    67 KTKT-DTKVPGSKVAT-LENLYNTEYYTTLGFGNPPQDLKVLIDTGSANLWVL-----SSKCPDS 124
            .|:| :.|:..|...| |:|               ..|.:..:...|:|.:..     ||.||..
plant    55 PTRTFNLKLDSSTHLTCLDN---------------DDDHQCSLSDKSSNTFSTISCNNSSLCPHV 104

  Fly   125 VAPCANRIKYNSSASTTYRAINTAFNIAYGSNSEEGPIALSGFQSQDTVNFAGYSIKNQIFAEIT 189
            .....|  .:|::.:.|..:::.....:.....|..| :.||:...||:         |:.:.||
plant   105 STNYTN--YFNATTTNTTTSVSLLCTPSDFCRYEASP-SSSGYLVSDTL---------QLTSSIT 157

  Fly   190 NAPETAFLKSQLDGILGLGFASIAINSITPP---------------FYNLMAQGLVNRSVFSIYL 239
            :.      ::.|..:.|..|...|.|..||.               .::|::|..:.|  ||..|
plant   158 DQ------ENSLSIVRGFVFGCGARNRATPEEDGGGVDGRLSLTTHRFSLLSQLRLTR--FSHCL 214

  Fly   240 ------NRN----GTNAINGGELIL------GGSDSGLYSGCLTYVPVSSAGYWQFTMTSANLNG 288
                  :||    |:.|..||:::|      .|:::..|     :|.:......|..|.|...:|
plant   215 WPSAAGSRNYIRLGSAASYGGDMVLVPMLNMTGTEAYSY-----HVALFGISLGQQRMRSNESSG 274

  Fly   289 FQFCENCEAILDVGTSLIVVPEQVLDTI-NQILGVLNPTASNGVFLVDCSS------IGDLPDIV 346
            .        .:||||....:...:.:.: .::...:.|..:..|..:.|.:      |..||.:.
plant   275 I--------AIDVGTYYTSLEPSLYEEVKEELTAQIGPAVAYEVNELMCFTTEVGLEIDSLPKLT 331

  Fly   347 -------FTVARRKFPLKSS 359
                   :|::.:...|:.|
plant   332 LHFQGLDYTISNKGLYLQDS 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31926NP_001259870.1 pepsin_retropepsin_like 82..406 CDD:299705 61/328 (19%)
Asp 89..408 CDD:278455 59/321 (18%)
AT5G24820NP_568459.1 pepsin_retropepsin_like 133..399 CDD:416259 49/250 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D753343at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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