DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31926 and Bace

DIOPT Version :9

Sequence 1:NP_001259870.1 Gene:CG31926 / 326174 FlyBaseID:FBgn0051926 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster


Alignment Length:396 Identity:168/396 - (42%)
Similarity:235/396 - (59%) Gaps:33/396 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LTVLAVLAFEAEARKRVRIGLHKNPEPIEENIKNELKTLSIKHNLNVDDTKAKTKTDTKVPGSKV 79
            :.|:.:||..|.|.      ||:.|...|:|.        :|...||...|:..:|..::|..:.
  Fly     5 IAVVVLLAALASAE------LHRVPILKEQNF--------VKTRQNVLAEKSYLRTKYQLPSLRS 55

  Fly    80 A---TLENLYNTEYYTTLGFGNPPQDLKVLIDTGSANLWVLSSKCPDSVAPCANRIKYNSSASTT 141
            .   .|.|..|..||..:..|.|.|..|||.|:||:||||.|:.|....  |....:|:||||:|
  Fly    56 VDEEQLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDA--CLTHNQYDSSASST 118

  Fly   142 YRAINTAFNIAYGSNSEEGPIALSGFQSQDTVNFAGYSIKNQIFAEITNAPETAFLKSQLDGILG 206
            |.|...:|:|.||:.|      |:|:.|.|||:..|.||::|.|||.||.|.|.|..:..|||||
  Fly   119 YVANGESFSIQYGTGS------LTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILG 177

  Fly   207 LGFASIAINSITPPFYNLMAQGLVNRSVFSIYLNRNGTNAINGGELILGGSDSGLYSGCLTYVPV 271
            :.:.|:|::.:.|||||:::||||:.||||.||.|:||:.: |||||.||||:.||||.|||||:
  Fly   178 MAYESLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDGTSTM-GGELIFGGSDASLYSGALTYVPI 241

  Fly   272 SSAGYWQFTMTSANLNGFQFCENCEAILDVGTSLIVVPEQVLDTINQILGVLNPTASNGVFLVDC 336
            |..|||||||..::::|:..|::|:||.|.||||||.|.....|:::||.|    ..:|  .:||
  Fly   242 SEQGYWQFTMAGSSIDGYSLCDDCQAIADTGTSLIVAPYNAYITLSEILNV----GEDG--YLDC 300

  Fly   337 SSIGDLPDIVFTVARRKFPLKSSDYVLRYGNTCVSGFTSMNGNSLLILGEIFLGAYYTTYDIVYK 401
            ||:..|||:.|.:....|.||.|.|:::....|:|.|..| |....|||::|:|.|||.:|:...
  Fly   301 SSVSSLPDVTFNIGGTNFVLKPSAYIIQSDGNCMSAFEYM-GTDFWILGDVFIGQYYTEFDLGNN 364

  Fly   402 LIGLAP 407
            .||.||
  Fly   365 RIGFAP 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31926NP_001259870.1 pepsin_retropepsin_like 82..406 CDD:299705 150/323 (46%)
Asp 89..408 CDD:278455 149/319 (47%)
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 150/325 (46%)
Asp 68..371 CDD:278455 149/319 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455531
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D356089at33208
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

Return to query results.
Submit another query.