DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31926 and Bace1

DIOPT Version :9

Sequence 1:NP_001259870.1 Gene:CG31926 / 326174 FlyBaseID:FBgn0051926 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_035922.4 Gene:Bace1 / 23821 MGIID:1346542 Length:501 Species:Mus musculus


Alignment Length:387 Identity:96/387 - (24%)
Similarity:171/387 - (44%) Gaps:63/387 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 KTKTDTKVPGSKVATLENLYNTE------YYTTLGFGNPPQDLKVLIDTGSANLWVLSSKCPDSV 125
            :|..:::.||.:.:.:|.:.|..      ||..:..|:|||.|.:|:||||:|..|  ...|.  
Mouse    46 ETDEESEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAV--GAAPH-- 106

  Fly   126 APCANRIKYNSSASTTYRAINTAFNIAYGSNSEEGPIALSGFQSQDTVNF---AGYSIKNQIFAE 187
             |..:|. |....|:|||.:.....:.|.....||.:      ..|.|:.   ...:::..| |.
Mouse   107 -PFLHRY-YQRQLSSTYRDLRKGVYVPYTQGKWEGEL------GTDLVSIPHGPNVTVRANI-AA 162

  Fly   188 ITNAPETAFLKSQLDGILGLGFASIA--INSITPPFYNLMAQGLVNRSVFSIY-------LNRNG 243
            ||.:.:.....|..:|||||.:|.||  .:|:.|.|.:|:.|..: .::||:.       ||:..
Mouse   163 ITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHI-PNIFSLQLCGAGFPLNQTE 226

  Fly   244 TNAINGGELILGGSDSGLYSGCLTYVPVSSAGYWQFTMTSANLNGFQFCENC------EAILDVG 302
            ..|..||.:|:||.|..||:|.|.|.|:....|::..:....:||.....:|      ::|:|.|
Mouse   227 ALASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSG 291

  Fly   303 TSLIVVPEQVLDTINQILGVLNPTAS--NGVFLVD---CSSIGDLPDIVF--------------- 347
            |:.:.:|::|.:...:.:...:.|..  :|.:|.:   |...|..|..:|               
Mouse   292 TTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQS 356

  Fly   348 ---TVARRKFPLKSSDYVLRYGNTCVSGFTSMNGNSLLILGEIFLGAYYTTYDIVYKLIGLA 406
               |:..::: |:..:.|....:.|.. |.....::..::|.:.:..:|..:|...|.||.|
Mouse   357 FRITILPQQY-LRPVEDVATSQDDCYK-FAVSQSSTGTVMGAVIMEGFYVVFDRARKRIGFA 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31926NP_001259870.1 pepsin_retropepsin_like 82..406 CDD:299705 92/370 (25%)
Asp 89..408 CDD:278455 91/365 (25%)
Bace1NP_035922.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..58 3/11 (27%)
beta_secretase_like 72..437 CDD:133140 91/361 (25%)
Asp 75..416 CDD:278455 90/356 (25%)
Interaction with RTN3. /evidence=ECO:0000250 479..501
DXXLL. /evidence=ECO:0000250|UniProtKB:P56817 496..500
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4239
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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