DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31926 and bace2

DIOPT Version :9

Sequence 1:NP_001259870.1 Gene:CG31926 / 326174 FlyBaseID:FBgn0051926 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001135590.1 Gene:bace2 / 100216145 XenbaseID:XB-GENE-1014090 Length:499 Species:Xenopus tropicalis


Alignment Length:378 Identity:102/378 - (26%)
Similarity:161/378 - (42%) Gaps:65/378 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 PGSKVATLENLYNTE------YYTTLGFGNPPQDLKVLIDTGSANLWVLSSKCPDSVAPCANRIK 133
            ||.::.....:.|.|      ||..|..|.|||.:.:|:||||:|..|..:..||...      .
 Frog    54 PGGQINFFSMVNNLEGDSGRGYYLELLIGTPPQKMNILVDTGSSNFAVAGALNPDITT------F 112

  Fly   134 YNSSASTTYRAINTAFNIAYGSNSEEGPIALSGFQSQDTVNFAGYSIKNQIFAEITNAPETAFLK 198
            ::|..||:|..:||...:.|...|..|.:..........||  |..:.|  .|.|..: |..||.
 Frog   113 FDSKLSTSYEPLNTQVTVRYTQGSWTGLLGKDVISMPKGVN--GTFLIN--IASIFQS-ENFFLP 172

  Fly   199 S-QLDGILGLGFASIA-INSITPPFYNLMAQGLVNRSVFSIYLNRNGTNA----INGGELILGGS 257
            : ...|||||.::::| .:|...||::.:.|.....::||:.:...|..:    ||.|.|:|||.
 Frog   173 NINWQGILGLAYSTLAKPSSSVEPFFDSLVQQENIPNIFSMQMCGAGQPSPGIGINAGSLVLGGI 237

  Fly   258 DSGLYSGCLTYVPVSSAGYWQFTMTSANLNGFQFCENC------EAILDVGTSLIVVPEQV---- 312
            :..||.|.:.|.|::...|:|..:....:.|.....:|      :||:|.||:|:.:|::|    
 Frog   238 EPSLYQGDIWYTPITEEWYYQVEVLKFEVGGQNLNLDCTVYNSDKAIVDSGTTLLRLPDKVFNAM 302

  Fly   313 LDTINQILGVLNPTAS--NGVFLVDCSSIGD----LPDIVF----TVARRKF--PLKSSDYV--- 362
            :|.|.|...:.|..|.  .|:.|.......|    .|||..    |.:.|.|  .||...|:   
 Frog   303 VDAIVQTSLIQNFNAEFWAGLQLACWDKTQDPWNYFPDISIYLRDTNSSRSFRLTLKPQLYIQSV 367

  Fly   363 ---------LRYGNTCVSGFTSMNGNSLLILGEIFLGAYYTTYDIVYKLIGLA 406
                     .|:|.:        ...|.|::|...:..:|..:|...|.:|.|
 Frog   368 LTFQESLNCFRFGIS--------QSASALVIGATVMEGFYVIFDRAEKRVGFA 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31926NP_001259870.1 pepsin_retropepsin_like 82..406 CDD:299705 99/369 (27%)
Asp 89..408 CDD:278455 99/364 (27%)
bace2NP_001135590.1 beta_secretase_like 72..433 CDD:133140 98/360 (27%)
Asp 75..412 CDD:278455 97/355 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D753343at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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