DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl3 and Nepl4

DIOPT Version :9

Sequence 1:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_609019.1 Gene:Nepl4 / 33889 FlyBaseID:FBgn0031805 Length:652 Species:Drosophila melanogaster


Alignment Length:705 Identity:142/705 - (20%)
Similarity:257/705 - (36%) Gaps:174/705 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WLLLLLCSTV----------------------CSANPNLEIMKRMLDDMDEKVEPCHNFYNSSQK 54
            |..|||..:.                      |::..|.:.:..::..:|.:..||.:||  :..
  Fly     6 WTALLLLGSATCGSSVPVKANDPEQSCPYLGECNSTINQQHIDTLMSYVDSEKNPCEDFY--AYA 68

  Fly    55 NLKW------HAFATVSDQFQL--LFDGIENEVFEKHSFEE-------KLQRLYKICSTMERPSL 104
            ..||      |..||:..:.|:  .::.:..::....|..|       |:...|:.|..:|:|.|
  Fly    69 CGKWRAKHGSHTTATMISESQINRQYEDLFLQLLRNPSAPEYGYPMFAKVLAHYQSCIALEKPDL 133

  Fly   105 LRYFELVKPG--EDLNWPFLTPRGGKWPKEKFQWMEALARLRRYGF---------------NDIM 152
            .||.||:...  ..||              ...||..||.|.|||:               :.::
  Fly   134 RRYIELLDRDLLASLN--------------STHWMHLLAALGRYGYHGHYVQVEVRWYNATHHMI 184

  Fly   153 FGMSIRQDPNSDSGQPIVVFEKKYDSLFRFIESLQNIGLPP--KLAKEIAPLDNAIQEMYK---S 212
            |.:...:..|....|.|      ||:|     |......||  :|.::...|:..:..:.|   :
  Fly   185 FLLPHNRHLNLSLTQDI------YDAL-----SQDGSSWPPLHQLQEQFRSLEQNLVRLAKPHSA 238

  Fly   213 DMKFEHYARDAAPVKRISLGQLEIYGVSLTKYLEIVFGRPFSPDFVVHVENLYYLRGLQNLMTAV 277
            |..|.:|:.|..        :.|:.|:...:.|....||....:.|..|::|..:.||...:..|
  Fly   239 DDTFRNYSLDQI--------RTEVPGLHWDEALRTQLGRSVPGNHVFQVDDLDAIEGLVEYLNTV 295

  Fly   278 PSQVVANYLTARFSFYIMFTFMKH-------------GDSCVTTMRQSMEFASNLLFEERILGRK 329
            .:.::..|..|||..:::  .:.|             |.:|:..||:|:....|.::|.....|:
  Fly   296 DTLLLNRYSLARFLSHLL--ELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVYERSFYSRR 358

  Fly   330 KLRSYQNQAGKIFDAIRQQLNIRLERNVLKLPPAEISLLQKKLNGLSLSIGNLPGKA-------- 386
            : .:.:.....:|..::.||.:|::.|...|....:..||.|::.:.:::||||...        
  Fly   359 R-HADELVIHSVFQQLQSQLELRVQHNAFNLSQDLVKSLQAKVHQMRINVGNLPPNVTEQFYWDS 422

  Fly   387 ------------GHRRFVTRYY---KELEFADDEELATAHLKVLEHRTRAELSLLDQPNFKDRRY 436
                        .|...:..||   .:||.:.|:|..........|          .|.|.|.  
  Fly   423 DRRWSVGRDFYENHLNSLLYYYTLVADLESSSDQEERDIWYSFNMH----------TPEFPDN-- 475

  Fly   437 MLHSYPISNFFFETAYEENGNTIYVAYDFLADASFDPDSHDIFKVTPLGIRFGLEMLKSFDLFNC 501
             :.:.|   :|:..     ||.|:|.|.::....||.:.........|....|.|::.:||....
  Fly   476 -IDATP---YFYCL-----GNIIFVPYSYVKRPFFDANFWPALLYGDLANTLGHEIMHAFDTDLV 531

  Fly   502 KHHKVNMLQLFDDN----QITTAGDECVSAWTQDNLLSQRDQYLVVLHLVHEAYFAEGSKFSQRQ 562
            .:.....|:.|.|.    ::......|::  :...:|::|...:....|..:.|   |..:..|.
  Fly   532 DYDAQGNLRNFSDQLGEVELYNGAVGCLN--SSAVMLNERTSDVSGSRLAMQTY---GGDWLTRS 591

  Fly   563 PNFTTMSLRELFFFRFGQSSFGQTLYFGSDFVEGGSP-IN-SLTRLPVFVRTFNC 615
            .|      ..|:|.:|.....|..   |..:.:.||. :| :|.::|.|...|.|
  Fly   592 GN------GRLYFLQFAHFFCGDE---GDQYHDSGSQRLNYALGQVPQFAEVFRC 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl3NP_608904.1 GluZincin 42..581 CDD:301352 125/615 (20%)
Nepl4NP_609019.1 PepO 51..643 CDD:226118 136/660 (21%)
GluZincin 59..649 CDD:301352 135/652 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.