DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl3 and Nep3

DIOPT Version :9

Sequence 1:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001245775.1 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster


Alignment Length:729 Identity:149/729 - (20%)
Similarity:253/729 - (34%) Gaps:190/729 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EIMKRMLDDMDEKVEPCHNFYNSS-----------QKNLKWHAFATVSDQFQLLFDGIENEVFEK 82
            ||:|    .:|..|:||.:||..|           :....|..|..:....||:   |.| |.||
  Fly   114 EILK----SIDVTVDPCDDFYGYSCNQWIKNNPIPEGKSTWGTFGKLEQMNQLI---IRN-VLEK 170

  Fly    83 --HSFEEKLQRLYKICSTMERPSLLRYFEL------------VKPGEDLNWPFLTPRGGKWPKEK 133
              .||:...:|..|:           |:|.            .||..||    |...|| |...|
  Fly   171 PAKSFKSDAERKAKV-----------YYESCLDADEHMEKLGAKPMNDL----LLQIGG-WNVTK 219

  Fly   134 -----FQWM--EALARL-RRYGFNDIMFGMSIRQDPNSDSGQPIVV------------FEKKYDS 178
                 ..|.  ..|..| .:|.|| .:||.:|.:|..:.|...|.:            :..|.|:
  Fly   220 SGYNVANWTMGHTLKILHNKYNFN-CLFGWAIGEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDN 283

  Fly   179 ----LFRFIESL----------------QNIGL---PPKLAKEIAPLDNAIQE--MYKSDMKFEH 218
                |..:||.:                |.||:   ..|||....||::...|  ||.       
  Fly   284 HRKVLNEYIEYMTKVCVLLGANESDARAQMIGVINFEKKLANITIPLEDRRNEEAMYH------- 341

  Fly   219 YARDAAPVKRISLGQLEIYGVSLTKYLE---IVFGRPFSPDFVVHVENLYYLRGLQNLM-----T 275
                  |::...|.:|..: ::.|.:.:   .:.||..:.|.||.|....:|:.|.:::     |
  Fly   342 ------PMQLRQLSKLAPF-LNWTDHFDNAMQMVGRRVTDDEVVVVYAPDFLKNLSDIILKMEQT 399

  Fly   276 AVPSQVVANYLT--------------ARFSFYIMFTFMKHGDS-------CVTTMRQSMEFASNL 319
            ......:.|||.              .|.::..:...:...|.       ||:.....:.||...
  Fly   400 EEGKITLNNYLVWQAVRTLTSCLSKPFRDAYKGVRKALMGSDGGEEIWRYCVSDTNNVVGFAVGA 464

  Fly   320 LFEERILGRKKLRSYQNQAGKIFDAIRQQLNIRLERNVLKLPPAEISLLQKKLNGLSLSIGNLPG 384
            :|..:....:...:.:....:|.:|.:..|     :|:..:.........:|.|.:|..|| .|.
  Fly   465 IFVRQAFHGESKPAAEQMIAEIREAFKMNL-----QNLTWVDKQTREKAIEKANQISDMIG-FPD 523

  Fly   385 KAGHRRFVTRYYKELEFADDEELATAHLKVLEHRTRAELSLLDQP----NFKDRRYMLHSYPISN 445
            .......:.:.|.||....:..... :::|..:..::.|..||||    |:......:::|    
  Fly   524 YILDPVELDKKYAELNITPNAYFEN-NIQVAIYNLKSNLKRLDQPVNKTNWGMTPQTVNAY---- 583

  Fly   446 FFFETAYEENGNTIYVAYDFLADASFDPDSHDIFKVTPLGIRFGLEMLKSFDLFNCKHHKV-NML 509
                  |....|.|......|....||.::........:|:..|.|:..:||....::.|. |:.
  Fly   584 ------YTPTKNQIVFPAGILQTPFFDINNPKSLNFGAMGVVMGHELTHAFDDQGREYDKFGNIN 642

  Fly   510 QLFDDNQITTAGD--ECVSAWTQDNLLSQR--------DQYLVVLHLVHEAYFAEGSKFSQRQPN 564
            :.:|...|....:  ||::.......::.|        .:.:.....:..||.|.....|.|..:
  Fly   643 RWWDSKSIERFNEKSECIARQYSGYKMNGRTLNGKQTLGENIADNGGLKAAYHAYQRTKSDRDVD 707

  Fly   565 F-----TTMSLRELFFFRFGQ----SSFGQT--LYFGSDFVEGGSP-----INSLTRLPVFVRTF 613
            .     ..::..:|||..|.|    |:..:|  |....|   ..||     |.:|:.:..|...|
  Fly   708 ILKLPGLNLTHSQLFFVSFAQVWCSSTTDETNLLQMEKD---PHSPSQFRVIGTLSNMKEFAEVF 769

  Fly   614 NCLAPGEQLTTTQK 627
            .| .||:::..|:|
  Fly   770 QC-KPGKRMNPTEK 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl3NP_608904.1 GluZincin 42..581 CDD:301352 130/661 (20%)
Nep3NP_001245775.1 M13 123..784 CDD:189000 145/716 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454985
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.