DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl3 and frma

DIOPT Version :9

Sequence 1:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:634 Identity:108/634 - (17%)
Similarity:203/634 - (32%) Gaps:172/634 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KVEPCHNFYNSSQKNLKWHAFATVSDQFQLLFDGI--------------ENEVFEKHSFEEKLQR 91
            :.:||.|||..:..|  |.| :..:|.::...|.:              |.|..|.| |.::|:.
  Fly    24 QADPCQNFYKVACGN--WSA-SHATDSYESFMDRLDYNYQEKLADLLDNEREDDEPH-FLQQLRN 84

  Fly    92 LYKIC-STMERPSLLRYFELVKPGEDLNWPFLTPRGGKWPKEKFQ-------------WMEALAR 142
            .|..| ..:.:..:||..|.:...|::....|:.  |.....:.|             |.:.::.
  Fly    85 FYTACRKPLSQDQVLRILEHLIVMENIQNEELSV--GLTAAFRLQVLIDLNDSNTYDIWKQLMSH 147

  Fly   143 LRRYGFNDIMFGMSIRQDPNSDSGQPIVVFEKKYDSLFRFIESLQNIGLPPK--LAKEIAPLDNA 205
            .:.:             |||:.:.:|:.  .:.:|.|:   .||..|..|.|  ..:|::.|:..
  Fly   148 RKHW-------------DPNTTNREPLT--REMFDKLW---ASLPKIPFPFKEYYWRELSELEEK 194

  Fly   206 IQEMYKSDMKFEHYARDAAPVKRISLGQLEIYGVSLTKYLEIVFGRPFSPDFVVHVENLYYLRGL 270
            |......|..|:                                    |.|.|..:...:.:...
  Fly   195 IMSYGSEDDGFD------------------------------------SGDLVTRIPPFWMMPWP 223

  Fly   271 QNLMTAVPSQVVANYLTARFS-FYIMFTFMK---------------HGDSCVTTMRQSMEFASNL 319
            ...:|......:|::|..:.: |.:.:.:|:               ..|.|....||.:...:..
  Fly   224 NGNITYENLSQMAHWLDIKANEFILTYIYMRLKLVAEGVSTESWHIDRDQCAEQSRQILSHPAAW 288

  Fly   320 LFEERILGRKKLRSYQNQAGKIFDAIRQQLNIRLERNVLKLPPAEISLLQKKLNGLSLSIGNLPG 384
            |.|:.....|:....|:    ||..::|:...:|..|......:....|..||..:.|.:..||.
  Fly   289 LVEKNHPRLKEEPVLQD----IFAELKQRFGQKLLANRNNFTRSTQHFLLGKLKRMRLRLSILPR 349

  Fly   385 KAGHR---RFVTRYYKELEFADDEELATAHLKVLEHRTRAELSLLDQPNFKDRRYMLHS------ 440
            .:..:   |.:.|:|:::.....:.....|:.:...|:..:.:.|....|  .|.::.|      
  Fly   350 NSSAQSMVRRIERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVF--GRQLIPSRISKSD 412

  Fly   441 -YPIS----NFFFETAYEENGNTIYVAYDFLADASFDPDSHDIFKVTPLGIRFGLEMLKSFDLFN 500
             ||..    ..:....|....|.:.|....|....:......|...:.||...|.|:...|    
  Fly   413 LYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGF---- 473

  Fly   501 CKHHKVNMLQLFDDNQITTAGDECVSAWTQDNLLSQRDQY---------------------LVVL 544
                         |::..|.....|.:...|..|.:..::                     ...|
  Fly   474 -------------DSEGMTFSSHGVGSSAVDRELDRNPRFQQELGCLRRRFGRKRYEKFADASGL 525

  Fly   545 HLVHEAYFAEGSKFSQRQPNFTTM-SLRELFFFRFGQSSFGQTLYFGSD 592
            .|.:.|||.......:|..:...: :.::.||..|.|       :|.||
  Fly   526 ELAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHNFAQ-------FFCSD 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl3NP_608904.1 GluZincin 42..581 CDD:301352 104/620 (17%)
frmaNP_572226.2 GluZincin 25..601 CDD:301352 108/633 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454864
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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