DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl3 and Mmel1

DIOPT Version :9

Sequence 1:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001101467.2 Gene:Mmel1 / 313755 RGDID:1309299 Length:774 Species:Rattus norvegicus


Alignment Length:731 Identity:148/731 - (20%)
Similarity:259/731 - (35%) Gaps:187/731 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 STVCSANPNLEIMKRMLDDMDEKVEPCHNFYNSS-----------QKNLKWHAFATVSDQFQLLF 72
            |.:|:....:....|:|.:||:..:||.|||..:           :.|.::..|..:.|:.:::.
  Rat    82 SDICTTPSCVIAAARILQNMDQSKKPCDNFYQYACGGWLRHHVIPETNSRYSVFDILRDELEVIL 146

  Fly    73 DGI-ENEVFEKHSFEEKLQRLYKIC---STMER---PSLLRYFELVKPGEDLNWPFLTPR----- 125
            .|: |:...:.....||.:.||:.|   |.:|:   ..||...:::.     .||....:     
  Rat   147 KGVLEDSSVQHRPAVEKAKTLYRSCMNQSVIEKRDSEPLLNVLDMIG-----GWPVAMDKWNETM 206

  Fly   126 GGKWPKEKFQWMEALARLRRYGFNDIMFGMSIRQDPNSDS-----------GQPIVVFEKKYDS- 178
            |.||..|:     .||.|.......::..:.|..|..:.|           |.|...:..|.|| 
  Rat   207 GPKWELER-----QLAVLNSQFNRRVLIDLFIWNDDQNSSRHVIYIDQPTLGMPSREYYFKEDSH 266

  Fly   179 -----LFRFIESL-----QNIGLPPKLAKEIAPLDNAIQEMYKSDMKFE-HYARDAAPVK----- 227
                 ..:|:.|:     :::.||.:        .:.:||.....:..| |.|....|.:     
  Rat   267 RVREAYLQFMTSVATMLRRDLNLPGE--------TDLVQEEMAQVLHLETHLANATVPQEKRHDV 323

  Fly   228 -----RISLGQLE----IYGVSLTKYLEIVFGR---PFSPDFVVHVENLYYLRGLQNLMTAVPSQ 280
                 |:.|.:|:    :.|.:.|.:::.|...   ...|:..|.|..:.||..|:.::...|:|
  Rat   324 TALYHRMGLEELQERFGLKGFNWTLFIQNVLSSVQVELLPNEEVVVYGIPYLENLEEIIDVFPAQ 388

  Fly   281 VVANYLT-----------------ARFSF--YIMFTFMK--HGDSCVTTMRQSMEFASNLLFEER 324
            .:.|||.                 ||..:  .:..|.|:  ....||:.:..:||.|...|:.:|
  Rat   389 TLQNYLVWRLVLDRIGSLSQRFKEARVDYRKALYGTTMEEVRWRECVSYVNSNMESAVGSLYIKR 453

  Fly   325 ILGR----------KKLRSYQNQAGKIFDAIRQQLNIRLERNVLKLPPAEISLLQKKLNGLSLSI 379
            ...:          :|:||       :|.....:||...|.:            :||....:|:|
  Rat   454 AFSKDSKSIVSELIEKIRS-------VFVDNLDELNWMDEES------------KKKAQEKALNI 499

  Fly   380 GNLPGKAGH-----RRFVTRYYKELEFADD--EELATAHLKVLEHRTRAELSLLDQPNFKDRRYM 437
            ....|...:     .|.:...|..|.|::|  .|....:||     ..|:.||.......|:...
  Rat   500 REQIGYPDYILEDNNRHLDEEYSSLTFSEDLYFENGLQNLK-----NNAQRSLKKLREKVDQNLW 559

  Fly   438 LHSYPISNFFFETAYEENGNTIYVAYDFLADASFDPDSHDIFKVTPLGIRFGLEMLKSFD----- 497
            :....:.|.|    |..|.|.|......|....|..|.........:|:..|.|:...||     
  Rat   560 IIGAAVVNAF----YSPNRNLIVFPAGILQPPFFSKDQPQALNFGGIGMVIGHEITHGFDDNGRN 620

  Fly   498 ------------LFNCKHHKVN---MLQLFDDNQITTAGDECVSAWTQ--DNLLSQ---RDQYLV 542
                        .|:.:|.:..   |:..:.:.....|.::.|:.::.  :|:...   |..|..
  Rat   621 FDKNGNMLDWWSNFSARHFRQQSQCMIYQYSNFSWELADNQNVNGFSTLGENIADNGGVRQAYKA 685

  Fly   543 VLHLVHEAYFAEGSKFSQRQPNFTTMSLRELFFFRFGQ---SSFGQTLYFGSDFVEGGSP----- 599
            .|.     :.|||.: .||.|.. .::..:|||..:.|   .|:.......|...:..||     
  Rat   686 YLQ-----WLAEGGR-DQRLPGL-NLTYAQLFFINYAQVWCGSYRPEFAIQSIKTDVHSPLKYRV 743

  Fly   600 INSLTRLPVFVRTFNC 615
            :.||..||.|...|:|
  Rat   744 LGSLQNLPGFSEAFHC 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl3NP_608904.1 GluZincin 42..581 CDD:301352 131/667 (20%)
Mmel1NP_001101467.2 Stop-transfer sequence. /evidence=ECO:0000255 14..21
M13 106..772 CDD:341056 142/707 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344514
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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