DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl3 and nep-24

DIOPT Version :9

Sequence 1:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_503005.3 Gene:nep-24 / 190993 WormBaseID:WBGene00013786 Length:567 Species:Caenorhabditis elegans


Alignment Length:562 Identity:114/562 - (20%)
Similarity:190/562 - (33%) Gaps:173/562 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLLLLCS-------------TVCSANPNLEIMKRMLDDMDEKVEPCHNFYNSSQKNLKWHAFATV 64
            ||||.|:             .||:....:.:...:.:..|..|:||.||:..:......|....:
 Worm    16 LLLLTCTAPLAIGATTPATRNVCNTPACITLAHMLHNYHDPSVDPCDNFHQFACGREHEHETEDI 80

  Fly    65 SDQFQLLFDGI------ENEVFEKHSFEEKLQRLYKICSTMERPSLL-RYFELVKPGEDLN---- 118
            ..:.....:.|      :||.....| |..::.|||.|.|:|:.|.. |...|....:|:.    
 Worm    81 YTKKTKTINNIMKRFLKKNETSRSKS-ENAMRTLYKACKTLEKNSTASRNKALQDIFQDIQSIGA 144

  Fly   119 WPFLTPRGGKWPKEKFQWMEALARLRRYGFNDIMFGMSIRQDPNSDSGQPIVVFEKKYDSLFRFI 183
            ||.:   ..||.:.||...:.|..|.|.|..:  ||:                |:     :.|::
 Worm   145 WPVV---DDKWDESKFDLNDFLVNLVRLGRKN--FGL----------------FQ-----MARYV 183

  Fly   184 ESLQNIGLPPKLA-KEIAPLDNAIQEMYKSDMKFEHYARDAAPVKRISLGQLEIYGVSLTKYL-- 245
             :::|..:.|:.| :....|...|.|:.|        |.......:..|..|..| |:|.|.|  
 Worm   184 -NVRNFAIGPEAAWRHNVDLGKTISEILK--------ANSVQTNNKKLLDDLAEY-VNLEKALSQ 238

  Fly   246 --------------------EIVFGR----PFSPD---FVVHVENLYYL----------RGLQNL 273
                                .:.|.|    ..|||   ....|..:.||          ..|:.:
 Worm   239 HKFNTVQPGYIFSERSDFVSSVNFSRLVLEMMSPDKRTLFPEVYQIMYLTNTSLFFGKNNNLETI 303

  Fly   274 MTAVPSQVVANYLTARFSFYIMFTFMKHGDSCVTTMRQSMEFASNLLF-EERI---LGRKKLRS- 333
            :.....:.:||||..:|               :.|....:.:.|...| |:::   |.|..||: 
 Worm   304 IRNTSKRALANYLIFKF---------------IDTSIADLTYGSPSAFCEQKVINFLPRAALRAF 353

  Fly   334 YQN--------QAGKIFDAIRQQLNIRLERNVLKLPPAE--ISLLQKKL-----NGLSLSIG--- 380
            |:|        :..|:.:|.:.||        ||:..|.  :|:..||:     :.:::.||   
 Worm   354 YRNFISKENRKKITKLTEATQVQL--------LKIIGATDWMSIKSKKIAMDRVSSMNMVIGYPD 410

  Fly   381 --NLPGKAGHRRFVTRYYKELEFADDEELATAHLKVLEHRTRAELSLLDQPNFKDRRYMLHSYPI 443
              :.|||      :...::.|..:..:...|...|:.......|:.           |.....|.
 Worm   411 YFDPPGK------LDGLFEHLNLSSSDTYYTVVRKINRFMREQEMD-----------YYTGEVPY 458

  Fly   444 SNFF----FETAYEENGNTIYVAYDFLADASFD---PDSHDI 478
            ...|    ....|..|.|.:.:...|..|..||   ||..:|
 Worm   459 YPLFPGLMTNAMYNANDNNLMIFAPFFDDPFFDSSFPDYANI 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl3NP_608904.1 GluZincin 42..581 CDD:301352 106/520 (20%)
nep-24NP_503005.3 GluZincin 58..561 CDD:301352 106/520 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161783
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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