DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl3 and nep-20

DIOPT Version :10

Sequence 1:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001317749.1 Gene:nep-20 / 188176 WormBaseID:WBGene00020293 Length:834 Species:Caenorhabditis elegans


Alignment Length:725 Identity:143/725 - (19%)
Similarity:264/725 - (36%) Gaps:194/725 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LSWLLLLLCS------TVCSANPNLEIMKRMLDDMDEKVEPCHNFYNSSQKNLKWHAFATVSDQF 68
            |.||||.:.:      ::|.:...:.:...:....|..|..|||||.::....|.|   ...|:.
 Worm   197 LFWLLLFIGARQDEKPSLCESPQCITLAFELSAYQDTSVSKCHNFYKATCGKYKHH---QALDKH 258

  Fly    69 QLLFDGIENEVFEK--------------HSFEEKLQRLYKICSTMERPSLLRYFELVKPGEDLNW 119
            :   |..:.||.::              ..||..::.::..|:...:..  .|.::.|..|.:  
 Worm   259 R---DAKKKEVVKRIVREFLRRNESSITSKFEPAIRLMFGKCNKFSQNK--TYLDIFKDIEKI-- 316

  Fly   120 PFLTPRGGKWPKEKFQWMEALARLRRY-------GFNDI-MFGMSIRQDPNSDSGQ-PIVV--FE 173
                   |.||..|..|::.:..|..|       ||.|. :|.:..||   ...|| |::.  .:
 Worm   317 -------GPWPVLKSDWVDVMFNLNDYLLSLVELGFTDFGLFKLEFRQ---LAFGQFPVIAPSEQ 371

  Fly   174 KKYDSLFRFI-ESLQNIGLPPKLAKEIAPLDNAIQEMYKSDMKFEHYARDAAPVKRISLGQLEIY 237
            |:.:.|.:.| |.|:..|:.....|    |...::|..:...:..|.:.:...||.|......: 
 Worm   372 KQGNQLEKIILEILEANGVQADRQK----LSKYLREYSEFKSQLRHMSLEGTSVKYIRYNASTL- 431

  Fly   238 GVSLTKYLEIVFGRPFSPDFVVHVE--------NLYYLRGLQNLMTAVPSQVVANYLTARFSFYI 294
            .|:::..::.:.....|...|..::        :.::.:.|..::.....:.:||||.  |.|..
 Worm   432 SVNISALVQKMAPMSTSSGLVRRIQSGILITNSSSFFGKNLDAIIQQTHKRTLANYLI--FHFID 494

  Fly   295 MFTF-----MKHGDSCVTTM--RQSMEFASNLLFEERILGRKKLRSYQNQAGKIFDAIRQQLNIR 352
            ..||     .||.:..:..:  |.|::..|....:|...|                 :..::...
 Worm   495 AVTFDLTSGAKHSEHTLIDLLPRGSLQVLSQDFVDEEDQG-----------------VMVEMAKD 542

  Fly   353 LERNVLKLPPAEISLLQKKLNGLSLSIGNLPGKAGHRR----------FVTRYYKELEFADDEEL 407
            |:::|:::    ||      .|.||..|:|..:...||          .||:|..|:...:.|:|
 Worm   543 LKKHVVEM----IS------EGSSLDKGHLVFEEKERRKLIRKVQDILVVTKYPLEILNQNFEKL 597

  Fly   408 ATAHLKVLEHRTRAELSLLDQPNFKDRRY---MLHSY------PISNFFFETA-YEENGNTIYVA 462
            ...:...| |:...:|          ||:   .|..|      |.....:.:| ||:..|.:.:.
 Worm   598 NLTYSDSL-HKIIQKL----------RRFRSEQLIEYLGGDLDPTDKGMWGSAHYEQATNDLIII 651

  Fly   463 YDFLADASFDPDSHDIFKVTPLGIRFGLEMLKSFDLFNC----KHH-----KVNMLQLFDDNQIT 518
            ...:....||....:...:..:|.....|:.:|.|....    |.|     |...|:.||:|   
 Worm   652 APIIDGPYFDTSYPNYVNIFFMGFIISRELGRSLDSVRIRKDEKGHTENWLKSESLKRFDNN--- 713

  Fly   519 TAGDECVSAW----TQDNLLSQRDQYLVVLHLVHEAYFAEGSKFSQRQPN---------FTTMSL 570
                  |..|    |....|::    ::..|:.|||.|....|: :::.|         :.:|::
 Worm   714 ------VKCWRKKITGTRFLNE----MLADHVGHEASFMALKKW-EKEMNGTIVEKIRGYESMTM 767

  Fly   571 RELFFFRFGQSSFGQTLYFGSDFVEGGSP---------------IN-SLTRLPVFVRTFNCLAPG 619
            .::||..       |.|||...  .|||.               :| :...:|.|.:.|.| :..
 Worm   768 EQIFFHL-------QALYFCRP--PGGSTGELTAKDARQHYSTRVNEAFKNMPQFAKAFGC-SSN 822

  Fly   620 EQLTTTQKST 629
            :.:.:..|.|
 Worm   823 QNMNSKTKCT 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl3NP_608904.1 GluZincin 42..>434 CDD:472708 86/442 (19%)
nep-20NP_001317749.1 PHA02030 <71..139 CDD:222843
GluZincin 238..832 CDD:472708 134/682 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.