DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl3 and nep-13

DIOPT Version :9

Sequence 1:NP_608904.1 Gene:Nepl3 / 326172 FlyBaseID:FBgn0031678 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001342017.1 Gene:nep-13 / 173672 WormBaseID:WBGene00018196 Length:732 Species:Caenorhabditis elegans


Alignment Length:750 Identity:133/750 - (17%)
Similarity:246/750 - (32%) Gaps:232/750 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LCST-------VCSANPNLEIMKRMLDDMDEKVEPCHNFYNSSQKNLKWHAFATVSD-------- 66
            :|.|       ||.....:.:...:|:..:..::||.:||..|....:.|   |::|        
 Worm    72 ICKTDHNKTRDVCKTAECITLSSTLLNWQNTNIDPCEDFYEYSCGRYQEH---TLNDGIRANEKD 133

  Fly    67 --------QFQLLFDGIENEVFEKHSFEEKLQRLYKICSTMERPSLLRY---------------- 107
                    ||.|     :|:....:| |..|..||:.||       |||                
 Worm   134 TIVMKLIRQFVL-----KNQSTTSNS-ENALMLLYEKCS-------LRYRMENRHQETEVIQREV 185

  Fly   108 FELVKPGEDLNWPFLTPRGGKWPKEKFQWMEALARLRRYGFNDIMFGMS--------------IR 158
            ||.::            :.|.||.....|..:     .:..|:::..|:              |.
 Worm   186 FENIR------------KIGSWPIADKNWNSS-----HFNLNNMLSNMASIHMLPFGLFETRVIE 233

  Fly   159 QDPNSDSGQPIVV------FEKKYDSLFRFIESLQNI----GLPPKLAKEIA------------- 200
            ..|.:.:.:.:|:      |....:.|.|.|..|.::    .:..|:.:::|             
 Worm   234 LYPMNTTAKQLVIRPTKLKFSIPQEELVRAIRDLLSVNGITSIMKKVKEDVAESFALDKEIGNIH 298

  Fly   201 ----PLDNAIQEMYKS--DMKFEHYARDAAPVKRISLGQLEIYGVSLTKY----LEIVFGRPFSP 255
                |....:.|:.|:  |:.||...:.....|..:...|.      ||.    .|:.||:.   
 Worm   299 IDPQPKPATLSELQKAVPDIDFERIIKSYLNPKTGNWSSLR------TKIFSARFELFFGKN--- 354

  Fly   256 DFVVHVENLYYLRGLQNLMTAVPSQVVANYLTARFSFYIMFTFMKH------GDSCVTTMRQSME 314
                        ..|.:::.....:::||||..::..|..|.|..:      .|.|...:..|:.
 Worm   355 ------------NNLSSIIARTKPRILANYLFLKYIEYAYFFFFDNTKVFSDDDFCTEVVTTSLP 407

  Fly   315 FASNLLFEERILGRKKLRSYQNQAGKIFDAIRQQL-----NIRLERNVLKLPPAEISLLQKKLNG 374
            .||..:|......::.:.    .|.:|.:.::...     |.....|..:....|..:..||:.|
 Worm   408 RASLRVFVRNHFKKENMA----VASEIVEVVKTAYVEIINNSTWLHNSTRESAIEKVVKMKKVIG 468

  Fly   375 LSLSIGNLPGKAGHRRFVTRYYKELE--FADDEELATAHLKVLEHRTRAELSLLDQPN-FKDRRY 436
                                |.:|.|  .|.||...|..|.    |:.:...|:.:.| ||..:.
 Worm   469 --------------------YTEEYERTGALDEMFETLQLS----RSDSFFVLMTKVNRFKIEQL 509

  Fly   437 M-----------LHSYPISN-FFFETAYEENGNTIYVAYDFLADASFDPDSHDIFKVTPLGIRFG 489
            |           :....::| |:|.|.     |.:.|...||....||........:..:|....
 Worm   510 MDFVSSDSLLNPIEPLVMANAFYFPTK-----NLLNVLVPFLDKPLFDFKYPRYVAMAGVGRVLA 569

  Fly   490 LEMLKSFDLFNCKHHKVNMLQLF---DDNQITTAGDECVSA----WTQDNLLSQRDQYLVVLHLV 547
            .|:..:||:...:..::...:.:   :|.:......||.:.    :...:...:::...|:..::
 Worm   570 HEIGHAFDINGRQTDEIGRTRDWWTREDTEEYDRRSECFAEQFTNFKDPSFKGKQNGTEVLAEII 634

  Fly   548 HEAYFAEGSKFSQRQPNFTTMSLRELFFFRFGQSSFGQTLYF---GSDFV-----------EGGS 598
            .:|...|.|..:.::.|.|    .|....:|....||: |||   ..||.           :...
 Worm   635 ADALGMEASWIAFKKINLT----EEQGLIQFEDHDFGK-LYFQVAALDFCAPSRIEERYSDQLSH 694

  Fly   599 PIN------SLTRLPVFVRTFNCLAPGEQLTTTQK 627
            |.|      :.:....|..|:.| ..|.::...|:
 Worm   695 PTNKFRINGAFSNSRAFADTYKC-PVGSKMNPVQR 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl3NP_608904.1 GluZincin 42..581 CDD:301352 114/650 (18%)
nep-13NP_001342017.1 M13 104..729 CDD:189000 128/717 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161777
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.