DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tap42 and TAP42

DIOPT Version :9

Sequence 1:NP_723811.1 Gene:Tap42 / 326166 FlyBaseID:FBgn0051852 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_013741.1 Gene:TAP42 / 855043 SGDID:S000004630 Length:366 Species:Saccharomyces cerevisiae


Alignment Length:386 Identity:94/386 - (24%)
Similarity:156/386 - (40%) Gaps:71/386 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ELEVTELPFNGSEFQN-KVKTAMGLFEQATVIVNQVSMFSANELIDEVSTESLPFMLLPYFLGKL 90
            :||.|.|..:..|:|. .:.|...|....|.|.:::::||.||.||:|||.|:.|:.:.|:||.|
Yeast    18 KLEHTSLRQDSPEYQGLLLSTIKKLLNLKTAIFDRLALFSTNETIDDVSTASIKFLAVDYYLGLL 82

  Fly    91 TTKINSPNN----THSIELGEIYFK-------DHLQRCQEYDLC----------AAPKSQVAKAD 134
            .::..|.::    ..|::|  ||.|       :.|...|:|.|.          ...:.....::
Yeast    83 ISRRQSNDSDVAQRQSMKL--IYLKKSVESFINFLTLLQDYKLLDPLVGEKLGNFKDRYNPQLSE 145

  Fly   135 SQAEKSEQRELVEAAFNRNDKIAQYRRMKEIDEYMARMRDAVKNKTVD---DEDKRVFFLKYLDK 196
            ..|:....::|..|...|.:||..::|.|||...:..:...:||...|   ||..|..:|..|..
Yeast   146 LYAQPKNNKDLSGAQLKRKEKIELFQRNKEISTKLHCLELELKNNDEDHDHDELLRELYLMRLHH 210

  Fly   197 SIIDSKQELETLGVMKQLAQMRLARLAGGESDNEVDSFRPPNQNQSSASSTSRGHGHSHGPGHHH 261
            ..:|:...:|     :.|.:..:.......|.:||         :||.:...:........|...
Yeast   211 FSLDTINNIE-----QNLFECEMLSNFLKNSVHEV---------KSSGTQIRKESNDDDSTGFTD 261

  Fly   262 HHQQAAKP------KPLQPFIIT--RNATQKAVFGLGYPSLPIMTVDEFYQQRVDEGIFPDEEKV 318
            ..:...||      :.|:.|.:.  |...|:.|.|.|... |.|:|:||..:..:||        
Yeast   262 KLENINKPLIDKKGQVLRNFTLVDKRQQLQQKVRGYGQYG-PTMSVEEFLDKEFEEG-------- 317

  Fly   319 AKMNQAQAIAAARDPNEKEDEEKAVEELQAEQDDPEYIDRMRRMDEYKDVVRRGDGNRHNR 379
                  :.:....:|.:..|||.     ...||...|  :.|..||:|:...:|.||..||
Yeast   318 ------RVLQGGEEPEQAPDEEN-----MDWQDRETY--KAREWDEFKESHAKGSGNTMNR 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tap42NP_723811.1 TAP42 14..367 CDD:282084 88/372 (24%)
TAP42NP_013741.1 TAP42 4..355 CDD:398032 89/374 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342090
Domainoid 1 1.000 62 1.000 Domainoid score I2503
eggNOG 1 0.900 - - E1_KOG2830
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1700
Isobase 1 0.950 - 0 Normalized mean entropy S3266
OMA 1 1.010 - - QHG54512
OrthoFinder 1 1.000 - - FOG0003127
OrthoInspector 1 1.000 - - oto100073
orthoMCL 1 0.900 - - OOG6_102570
Panther 1 1.100 - - LDO PTHR10933
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1748
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.740

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