DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tap42 and Igbp1

DIOPT Version :9

Sequence 1:NP_723811.1 Gene:Tap42 / 326166 FlyBaseID:FBgn0051852 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_113812.1 Gene:Igbp1 / 58845 RGDID:62011 Length:340 Species:Rattus norvegicus


Alignment Length:397 Identity:114/397 - (28%)
Similarity:190/397 - (47%) Gaps:85/397 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AGGEDQ----KLTDIFLKGWNIFDELEVTELPFNGSEFQNKVKTAMGLFEQATVIVNQVSMFSAN 67
            |..|::    :|.::|.....:.:||||...|......|:||...:.|.|:|..:::|:.:||.|
  Rat     2 AASEEELLLPRLPELFETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRN 66

  Fly    68 ELIDEVSTESLPFMLLPYFLGKLTTKINSPNNTHSIELGEIYFKDHLQRCQEYDL-------C-- 123
            |.::|:::..|.::::|...|.||.|..:|:..          .|||||.:|:.:       |  
  Rat    67 EDLEEIASIDLKYLMVPALQGALTMKQVNPSKR----------LDHLQRAREHFIHFLTQCHCYH 121

  Fly   124 ----AAPKSQVAKADSQAEKSEQR--ELVEAAFNRNDKIAQYRRMKEIDEYMARMRDAVKNKTVD 182
                ..|:::...|::...:|...  .||..|..|..||.:|::.||::..::.::.||::...|
  Rat   122 VAEFQLPQTKNNSAENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVESGQAD 186

  Fly   183 DEDKRVFFLKYLDKSIIDSKQELETLGVMKQLAQMRLARLAGGESDNEV------DSFRPPNQNQ 241
            ||..|.::|.:|.:.|..|.:|:|::                   |.|:      ||.|..:..|
  Rat   187 DERVREYYLLHLRRWIGISLEEIESI-------------------DQEIKILKDKDSPREESACQ 232

  Fly   242 SSASSTSRGHGHSHGPGHHHHHQQAAKPKPLQPFIITRNATQKAVFGLGYPSLPIMTVDEFYQQR 306
            ||...                     || |::|||:|||..|..|||.|||||..|||.::|:|.
  Rat   233 SSLPE---------------------KP-PMKPFILTRNKAQAKVFGTGYPSLATMTVSDWYEQH 275

  Fly   307 VDEGIFPDEEKVAKMNQAQAIAAARDPNEKEDEEKAVEELQAEQDDPEYIDRMRRMDEYKDVVRR 371
            ...|..|| ..:||...|....||:   ::||:|:     :.|:::.:.:.|||..|::||...|
  Rat   276 QKYGALPD-RGIAKPPSADFQRAAQ---QQEDQEQ-----KDEENEEKALHRMREWDDWKDTHPR 331

  Fly   372 GDGNRHN 378
            |.|||.|
  Rat   332 GYGNRQN 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tap42NP_723811.1 TAP42 14..367 CDD:282084 104/373 (28%)
Igbp1NP_113812.1 TAP42 17..329 CDD:282084 105/371 (28%)
Interaction with PPP2CA. /evidence=ECO:0000250 99..203 27/113 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..242 9/42 (21%)
Interaction with MID1. /evidence=ECO:0000250 226..291 32/87 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..340 23/67 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337314
Domainoid 1 1.000 136 1.000 Domainoid score I4793
eggNOG 1 0.900 - - E1_KOG2830
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H44067
Inparanoid 1 1.050 147 1.000 Inparanoid score I4314
OMA 1 1.010 - - QHG54512
OrthoDB 1 1.010 - - D1348942at2759
OrthoFinder 1 1.000 - - FOG0003127
OrthoInspector 1 1.000 - - otm46045
orthoMCL 1 0.900 - - OOG6_102570
Panther 1 1.100 - - LDO PTHR10933
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2992
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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