DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tap42 and Igbp1b

DIOPT Version :9

Sequence 1:NP_723811.1 Gene:Tap42 / 326166 FlyBaseID:FBgn0051852 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001102825.1 Gene:Igbp1b / 502919 RGDID:1560971 Length:344 Species:Rattus norvegicus


Alignment Length:376 Identity:102/376 - (27%)
Similarity:182/376 - (48%) Gaps:55/376 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KLTDIFLKGWNIFDELEVTELPFNGSEFQNKVKTAMGLFEQATVIVNQVSMFSANELIDEVSTES 77
            ||.::...|..:.:|:|.|..|....:.|.||:.|:.|.|:|:.:::|:.:||.||..:|:::..
  Rat    12 KLRELLETGIELLEEVEATTQPTGSKQIQEKVRKALKLLEKASEMLSQLDLFSRNEDWEEIASAD 76

  Fly    78 LPFMLLPYFLGKLTTK-INSPNNTHSIELGEIYFKDHLQRCQEYDLCAAPKSQVAKADSQAEKSE 141
            |.:::||...|.||.| :.:.|..|.::.....|.:.|.:...|.:.   :.|:..|.|.:::|.
  Rat    77 LKYLMLPALKGALTLKLVGTSNRLHLLQDARELFMNFLTQSHNYHVA---EFQLPWAQSSSQESN 138

  Fly   142 ---------QRELVEAAFNRNDKIAQYRRMKEIDEYMARMRDAVKNKTVDDEDKRVFFLKYLDKS 197
                     :..||..|..|..||.:|::.|.:::.::.::.||::...|||..|.::|..|.:.
  Rat   139 PAAATSDTLEHNLVAMASQRQAKIQRYKQKKAVEQRLSSLKSAVESGEADDERVREYYLLQLRRW 203

  Fly   198 IIDSKQELETLGVMKQLAQMRLARLAGGESDNEVDSFRPPNQNQSSASSTSRGHGHSHGPGHHHH 262
            |..|..|::::                   |.|::..|  .::....:|.|:|            
  Rat   204 INISLDEIDSI-------------------DQEIEILR--ERDSFGEASVSQG------------ 235

  Fly   263 HQQAAKPKPLQPFIITRNATQKAVFGLGYPSLPIMTVDEFYQQRVDEGIFPDEEKVAKMNQAQAI 327
             ....:| ||:||::||:..|..|||.|||||..:||:::|:||....:.....:..|.......
  Rat   236 -SPQERP-PLKPFVLTRSVAQAQVFGAGYPSLATLTVNDWYEQRQKGEVSSSVREAEKQAPPLET 298

  Fly   328 AAARDPNEKEDEEKAVEELQAEQDDPEYIDRMRRMDEYKDVVRRGDGNRHN 378
            .:..:| ||.|.|      |.|::|...:.||:..|::||...||.|||.|
  Rat   299 LSVSEP-EKPDLE------QKEEEDENALHRMQEWDDWKDTHPRGYGNRQN 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tap42NP_723811.1 TAP42 14..367 CDD:282084 93/362 (26%)
Igbp1bNP_001102825.1 TAP42 13..333 CDD:398032 95/364 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337315
Domainoid 1 1.000 136 1.000 Domainoid score I4793
eggNOG 1 0.900 - - E1_KOG2830
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 147 1.000 Inparanoid score I4314
OMA 1 1.010 - - QHG54512
OrthoDB 1 1.010 - - D1348942at2759
OrthoFinder 1 1.000 - - FOG0003127
OrthoInspector 1 1.000 - - otm46045
orthoMCL 1 0.900 - - OOG6_102570
Panther 1 1.100 - - O PTHR10933
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2992
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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