DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tap42 and ppfr-4

DIOPT Version :9

Sequence 1:NP_723811.1 Gene:Tap42 / 326166 FlyBaseID:FBgn0051852 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001370777.1 Gene:ppfr-4 / 190617 WormBaseID:WBGene00022193 Length:327 Species:Caenorhabditis elegans


Alignment Length:359 Identity:107/359 - (29%)
Similarity:166/359 - (46%) Gaps:76/359 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FNGSEFQNKVKTAMGLFEQATVIVNQVSMFSANELIDEVSTESLPFMLLPYFLGKLTTKINSPNN 99
            |:..|.|.::||.:...:..|.:|||:.:||:||.|::|.|.|||::|:|.|||.|...:.:...
 Worm    30 FSTPELQPRIKTGIDNLQLVTKLVNQMRLFSSNEQIEDVPTNSLPYLLVPCFLGILHQNLMTEPG 94

  Fly   100 THSIEL--GEIYFKDHLQRCQEYDLCAAPKSQVAKADSQAEKSEQRELVEAAFN--RNDKIAQYR 160
            ....||  .:||.::.|.|.:  |||.. .:::...|...|:...:|..:.|..  |..|:.:::
 Worm    95 LKLDELRKSKIYMRNFLDRLR--DLCLI-TTRLPWEDEDTEEQNLKEKPKLAVEEIRRLKLERHK 156

  Fly   161 RMKEIDEYMARMRDAVKNKTVDDEDKRVFFLK---------YLDKSIIDSKQELETLGVMKQLAQ 216
            :.:|:.....|::..::..::|:::.|..::.         |.:...||  .||..|.:|.:.| 
 Worm   157 KKQELKMAELRIQKQLEAVSIDEQNLRELYITQLLFWSERCYEELQAID--DELPLLKMMAERA- 218

  Fly   217 MRLARLAGGESDNEVDSFRPPNQNQSSASSTSRGHGHSHGPGHHHHHQQAAKPKP-LQPFIITRN 280
                                                 || |..|.....|.|..| |:||||||:
 Worm   219 -------------------------------------SH-PHRHPAPPPATKTVPTLKPFIITRD 245

  Fly   281 ATQKAVFGLGYPSLPIMTVDEFYQQRVDEGIFPDEEKVAKMNQAQAIAAARDPNEKEDEEKAVEE 345
            |.||.|||||||.:|.|:|||:|.|:     |....:.|..:.|.|.|.|::..|          
 Worm   246 AQQKQVFGLGYPGIPAMSVDEWYHQK-----FGHNPQNAPQSSAPAGAEAQESEE---------- 295

  Fly   346 LQAEQDDPEYIDRMRRMDEYKDVVRRGDGNRHNR 379
               |.||.|...:..|.|||||..|||.||.||:
 Worm   296 ---EVDDDEARAKAMRWDEYKDDHRRGWGNMHNK 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tap42NP_723811.1 TAP42 14..367 CDD:282084 98/345 (28%)
ppfr-4NP_001370777.1 TAP42 11..316 CDD:398032 100/347 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157652
Domainoid 1 1.000 115 1.000 Domainoid score I3779
eggNOG 1 0.900 - - E1_KOG2830
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H44067
Inparanoid 1 1.050 128 1.000 Inparanoid score I3241
Isobase 1 0.950 - 0 Normalized mean entropy S3266
OMA 1 1.010 - - QHG54512
OrthoDB 1 1.010 - - D1348942at2759
OrthoFinder 1 1.000 - - FOG0003127
OrthoInspector 1 1.000 - - oto20517
orthoMCL 1 0.900 - - OOG6_102570
Panther 1 1.100 - - LDO PTHR10933
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1748
SonicParanoid 1 1.000 - - X2992
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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