DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31793 and VMR1

DIOPT Version :10

Sequence 1:NP_609930.4 Gene:CG31793 / 326161 FlyBaseID:FBgn0051793 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_011828.1 Gene:VMR1 / 856350 SGDID:S000001027 Length:1592 Species:Saccharomyces cerevisiae


Alignment Length:1428 Identity:419/1428 - (29%)
Similarity:697/1428 - (48%) Gaps:235/1428 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PNPRESAGILSSLMFCFALPILFKGRKQTLQPTDLY-KTLNEHEAASLGDEFFQGWEDEVARCRR 71
            |:....:.|||.:.:.:....:::.:|.|::..|:: .::.::....|                 
Yeast   266 PSREHISSILSCITWSWITNFIWEAQKNTIKLKDIWGLSMEDYSIFIL----------------- 313

  Fly    72 KGDSGRKPSVLRVIGRVFG-----------WRLIMSGITIAALELGTRATVPLLLAGLISEFSEH 125
            ||.:.|...:..:...:|.           |.|:.|.:.:          :|.:|.....|..::
Yeast   314 KGFTRRNKHINNLTLALFESFKTYLLIGMLWVLVNSIVNL----------LPTILMKRFLEIVDN 368

  Fly   126 GNGHS--YN-AQIYAVLLIACILASVLLTHPYMMGMMHLAMKMRVAVSSAIYRKALRLSRTSLGG 187
            .|..|  .| |.:|.:.:..|.|...:...........:.:::|..:...||.|.||....:...
Yeast   369 PNRSSSCMNLAWLYIIGMFICRLTLAICNSQGQFVSDKICLRIRAILIGEIYAKGLRRRLFTSPK 433

  Fly   188 TTT---------GQVVNLLSNDLNRFDRCLIHFHFLWLGPLELLIASYFLYEQIGMASFYGISIL 243
            |::         |.::||:|.|..:......:.:......:.:::....|:..:|:::|.||||:
Yeast   434 TSSDSDSISANLGTIINLISIDSFKVSELANYLYVTVQAVIMIIVVVGLLFNFLGVSAFAGISII 498

  Fly   244 VLYLPLQTYLSRVTSKLRLQTALRTDQRVRMMNEIISGIQVIKMYTWERPFGKLIGQMRRSEMSS 308
            ::..||...|:.:..|.:.||...||||:..:||.:..|:::|.:.|||.....|..:|:.|:.|
Yeast   499 LVMFPLNFLLANLLGKFQKQTLKCTDQRISKLNECLQNIRIVKYFAWERNIINEIKSIRQKELRS 563

  Fly   309 IRQMNLLRGILLSFEITLGRIAIFVSLLGFV---LGGG------------ELTAERAFCVTAFYN 358
            :.:.:|:..:              .|.|.||   |..|            :|.|..||...:.:.
Yeast   564 LLKKSLVWSV--------------TSFLWFVTPTLVTGVTFAICTFVQHEDLNAPLAFTTLSLFT 614

  Fly   359 ILRRTVSKFFPSGMSQFA-ELLVSMRRITNFMMREEANVIDMSERRDEKAEEEQHLLKEVEKRSY 422
            :|:..:.:.  |.|..|. :..||::||::|:            |.|:..:..|..:        
Yeast   615 LLKTPLDQL--SNMLSFINQSKVSLKRISDFL------------RMDDTEKYNQLTI-------- 657

  Fly   423 PVGIGKEPD-TLVEIKALRARWGQEQHDL---VLNNVNMSLRRGQLVAVIGPVGSGKSSLIQAIL 483
                  .|| ..:|.|.....|.:...|:   .|..:|:..:.|:|..::|..|||||:|:..:|
Yeast   658 ------SPDKNKIEFKNATLTWNENDSDMNAFKLCGLNIKFQIGKLNLILGSTGSGKSALLLGLL 716

  Fly   484 GELPPESGSVQV----------------SGKYSYASQEPWLFNASVRDNILFGLPMDKQRYRTVL 532
            |||...|||:.|                :..::|.||..||.|.:|::||:|....::.||..|:
Yeast   717 GELNLISGSIIVPSLEPKHDLIPDCEGLTNSFAYCSQSAWLLNDTVKNNIIFDNFYNEDRYNKVI 781

  Fly   533 KRCALERDLELL-HGDGTIVGERGASLSGGQRARICLARAVYRRADVYLLDDPLSAVDTHVGRHL 596
            ..|.|:||||:| .||.|.:||:|.:|||||:.||.||||||..|...||||.|||||:|....:
Yeast   782 DACGLKRDLEILPAGDLTEIGEKGITLSGGQKQRISLARAVYSSAKHVLLDDCLSAVDSHTAVWI 846

  Fly   597 FDECMRGFLGK-QLVILVTHQLQF-LEDADLIVIMDKGHVSACGTYEEMLKSG---QDFAQLLVE 656
            ::.|:.|.|.| :..|||||.:.. |.:|...::::.|.|...||..|:...|   :.:.||   
Yeast   847 YENCITGPLMKNRTCILVTHNVSLTLRNAHFAIVLENGKVKNQGTITELQSKGLFKEKYVQL--- 908

  Fly   657 STQNSGGGDEIITSPNLSRQSSALSTKSSNGSSSSLESMVEKEKPKPSAVS-----SQESRSGGQ 716
            |:::|      |...|.:|    |.....| .|..:|.:.|......:.|:     .:|.:|.|.
Yeast   909 SSRDS------INEKNANR----LKAPRKN-DSQKIEPVTENINFDANFVNDGQLIEEEEKSNGA 962

  Fly   717 IGLSMYK---KYFGAGCGVLVFVVLIMLCIGTQILASGGDYFLSYWVKNT-----ASSSTLD--- 770
            |...:||   |:||   |......|..|.|..|||.....:::.:||.:|     |....:|   
Yeast   963 ISPDVYKWYLKFFG---GFKALTALFALYITAQILFISQSWWIRHWVNDTNVRINAPGFAMDTLP 1024

  Fly   771 --------------IYYFTAINVGLVICALL---RTLLFFNITMHSSTELHNTMFQGLSRTALYF 818
                          .||.|...:..:|.|:|   :|::.|...|.:|.::.|.:...:....:.|
Yeast  1025 LKGMTDSSKNKHNAFYYLTVYFLIGIIQAMLGGFKTMMTFLSGMRASRKIFNNLLDLVLHAQIRF 1089

  Fly   819 FHTNPSGRILNRFANDLGQVD-EVMP--AVMLDCIQIFLTLTGIICVLCVTNPWYLINTFAMMLA 880
            |...|.|||:|||:.|:..|| |::|  .|.:.|:   :....||.::.|..|.:|.....:.:.
Yeast  1090 FDVTPVGRIMNRFSKDIEGVDQELIPYLEVTIFCL---IQCASIIFLITVITPRFLTVAVIVFVL 1151

  Fly   881 FYYWRDFYLKTSRDVKRLEAVARSPMYSHFSATLVGLPTIRAMGAQQTLIGQYDNYQDLHSSGYY 945
            :::...:||..||::|||:::.:||::.|||.||||:.||||.|.::..|.:..|..|.::..::
Yeast  1152 YFFVGKWYLTASRELKRLDSITKSPIFQHFSETLVGVCTIRAFGDERRFILENMNKIDQNNRAFF 1216

  Fly   946 TFVSTSRAFGYYLDL---FCVAYVISVILHNFFNPPLHNAGQIGLAITQALGMTGMVQWGMRQSA 1007
            ....|.:.|.:.:|:   |.|....|.||.|..|   .::|..|:::|.|:..|....|.:|..:
Yeast  1217 YLSVTVKWFSFRVDMIGAFIVLASGSFILLNIAN---IDSGLAGISLTYAILFTDGALWLVRLYS 1278

  Fly  1008 ELENAMTSVERVLEYKDLDPEGD----------FNSPAEKQPPKSWPKEGKLVTKDLSLRYEPDT 1062
            ..|..|.||||:.||..::.|..          .|.|       ||||:|::..::|||||.|  
Yeast  1279 TFEMNMNSVERLKEYSSIEQENYLGHDEGRILLLNEP-------SWPKDGEIEIENLSLRYAP-- 1334

  Fly  1063 NSPCVLKGLSFTIQPMEKVGIVGRTGAGKSSLINALFR-LSYNDGAILIDSLDTNDIGLHDLRSK 1126
            |.|.|::.:||.:.|..|:|||||||||||::|.|||| |....|.|.||..|.:.|.|..||..
Yeast  1335 NLPPVIRNVSFKVDPQSKIGIVGRTGAGKSTIITALFRLLEPITGCIKIDGQDISKIDLVTLRRS 1399

  Fly  1127 ISIIPQEPVLFSGTMRYNLDPFEQYPDDKLWKALEDVHL--KEEISELPS-------------GL 1176
            |:||||:|:||:||::.|:||:::|.:.|::|||..|:|  ..|..|:.:             .|
Yeast  1400 ITIIPQDPILFAGTIKSNVDPYDEYDEKKIFKALSQVNLISSHEFEEVLNSEERFNSTHNKFLNL 1464

  Fly  1177 QSIISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQATIRNKFKDCTVLTI 1241
            .:.|:|||.|.|.|:|||:.:||::|||.:|:::||||:::|..:|.|||..||::|...|:|||
Yeast  1465 HTEIAEGGLNLSQGERQLLFIARSLLREPKIILLDEATSSIDYDSDHLIQGIIRSEFNKSTILTI 1529

  Fly  1242 AHRLNTIMDSDKVLVMDAGHVVEFGSPYELLTASKAKVFHGMVMQTGKASFDHLLKVAENTKQ 1304
            ||||.:::|.|:::|||||.|.|:..|.|||...:. :|:.|...:|  ..:.|.::|:.:.:
Yeast  1530 AHRLRSVIDYDRIIVMDAGEVKEYDRPSELLKDERG-IFYSMCRDSG--GLELLKQIAKQSSK 1589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31793NP_609930.4 PLN03130 10..1305 CDD:215595 418/1426 (29%)
VMR1NP_011828.1 MRP_assoc_pro 212..1575 CDD:188098 416/1410 (30%)

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