DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31793 and ABCC4

DIOPT Version :9

Sequence 1:NP_609930.4 Gene:CG31793 / 326161 FlyBaseID:FBgn0051793 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_182301.1 Gene:ABCC4 / 819392 AraportID:AT2G47800 Length:1516 Species:Arabidopsis thaliana


Alignment Length:1347 Identity:450/1347 - (33%)
Similarity:713/1347 - (52%) Gaps:165/1347 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SAGILSSLMFCFALPILFKGRKQTLQPTDLYKTLNEHEAASLGDEFFQGWEDEVARCRRKGDSGR 77
            ||.:.|...:.:..|:|.||.|..|....:.....||:|..|...|...|.              
plant   254 SASVFSKTFWLWMNPLLSKGYKSPLTLEQVPTLSPEHKAERLALLFESSWP-------------- 304

  Fly    78 KPS------VLRVIGRVFGWRLIMSGITIAALELGTRATVPLLLAGLISEFSEHGNGHSYNAQIY 136
            |||      :...:.|.| |:.|:....:|.:.||.....|:|:...: :|:.......:.....
plant   305 KPSENSSHPIRTTLLRCF-WKEILFTAILAIVRLGVMYVGPVLIQSFV-DFTSGKRSSPWQGYYL 367

  Fly   137 AVLLIACILASVLLTHPYMMGMMHLAMKMRVAVSSAIYRKALRLSRTSLGGTTTGQVVNLLSNDL 201
            .::|:......||.||.:......|.|.:|..:.:|:|:|.|:|:.::......||:||.::.|.
plant   368 VLILLVAKFVEVLTTHQFNFDSQKLGMLIRSTLITALYKKGLKLTGSARQNHGVGQIVNYMAVDA 432

  Fly   202 NRFDRCLIHFHFLWLGPLELLIASYFLYEQIG---MASFYGISILVLYLPLQTYLSRVTSKLRLQ 263
            .:....::..|.:||.||::.:|...||..:|   :.:..|::.:.:::.|.|..:.     ..|
plant   433 QQLSDMMLQLHAIWLMPLQVTVALVLLYGSLGASVITAVIGLTGVFVFILLGTQRNN-----GYQ 492

  Fly   264 TAL--RTDQRVRMMNEIISGIQVIKMYTWERPFGKLIGQMRRSEMSSIRQMNLLRGILLSFE--- 323
            .:|  ..|.|::..||:::.::|||...||..|.|.|.:.|..|      ...|...|.|..   
plant   493 FSLMGNRDSRMKATNEMLNYMRVIKFQAWENHFNKRILKFRDME------FGWLSKFLYSIAGNI 551

  Fly   324 ITLGRIAIFVSLLGFVLG---GGELTAERAFCVTAFYNILRRTVSKFFPSGMSQFAELLVSMRRI 385
            |.|....:.:|.|.|...   |.:|.|...|..|..:.||:..: :.||..|...::.::|:.|:
plant   552 IVLWSTPVLISALTFATALALGVKLDAGTVFTTTTIFKILQEPI-RTFPQSMISLSQAMISLGRL 615

  Fly   386 TNFMMREEANVIDMSERRDEKAEEEQHLLKEVEKRSYPVGIGKEPDTLVEIKALRARWGQEQHDL 450
            .::||.:|     :||...|:|                  :|.:.:|.||::.....|..|.::.
plant   616 DSYMMSKE-----LSEDAVERA------------------LGCDGNTAVEVRDGSFSWDDEDNEP 657

  Fly   451 VLNNVNMSLRRGQLVAVIGPVGSGKSSLIQAILGELPPESGSVQVSGKYSYASQEPWLFNASVRD 515
            .|:::|..:::|:|.|::|.||||||||:.::|||:...||.|:|.|...|.:|..|:.|.:|:|
plant   658 ALSDINFKVKKGELTAIVGTVGSGKSSLLASVLGEMHRISGQVRVCGSTGYVAQTSWIENGTVQD 722

  Fly   516 NILFGLPMDKQRYRTVLKRCALERDLELLH-GDGTIVGERGASLSGGQRARICLARAVYRRADVY 579
            ||||||||.:::|..||..|:||:||:::. ||.|.:||||.:|||||:.||.||||||:..|||
plant   723 NILFGLPMVREKYNKVLNVCSLEKDLQMMEFGDKTEIGERGINLSGGQKQRIQLARAVYQECDVY 787

  Fly   580 LLDDPLSAVDTHVGRHLFDECMRGFLGKQLVILVTHQLQFLEDADLIVIMDKGHVSACGTYEEML 644
            ||||..||||.|.|..:|.:|:||.|..:.|:|||||:.||.:.|.|::|..|.:...|.|:|::
plant   788 LLDDVFSAVDAHTGSDIFKKCVRGALKGKTVLLVTHQVDFLHNVDCILVMRDGKIVESGKYDELV 852

  Fly   645 KSGQDFAQL---------LVESTQNSGGGDEI-------------ITSPNLSRQSSALSTKSSNG 687
            .||.||.:|         |||:     |.|..             .:||..|.:|..||..:...
plant   853 SSGLDFGELVAAHETSMELVEA-----GADSAAVATSPRTPTSPHASSPRTSMESPHLSDLNDEH 912

  Fly   688 SSSSLESMVEKEKPKPSAVSSQESRSGGQIGLSMYKKYFGAGCGVLVFVVLIMLCIGTQILASGG 752
            ..|.|.|.:.::..|   :..:|.|..||:.|.:||:|.....|....|:::...:..|......
plant   913 IKSFLGSHIVEDGSK---LIKEEERETGQVSLGVYKQYCTEAYGWWGIVLVLFFSLTWQGSLMAS 974

  Fly   753 DYFLSY--WVKNTASSSTLDIYYFTAINVGLVICALLRTLLF----FNITMHSSTELHNTMFQGL 811
            ||:|:|  ..||..|   .|...|.   :|.||.||:..:|.    :.:| |...:.....|:.:
plant   975 DYWLAYETSAKNAIS---FDASVFI---LGYVIIALVSIVLVSIRSYYVT-HLGLKTAQIFFRQI 1032

  Fly   812 SRTALY----FFHTNPSGRILNRFANDLGQVDEVMPAVMLDCIQIFLTLTGIICVLCVTNPWYLI 872
            ..:.|:    ||.|.||||||:|.:.|...||.::|.::...:.::.||..|..|.|        
plant  1033 LNSILHAPMSFFDTTPSGRILSRASTDQTNVDILIPFMLGLVVSMYTTLLSIFIVTC-------- 1089

  Fly   873 NTFAMMLAFY---------YWRDFYLKTSRDVKRLEAVARSPMYSHFSATLVGLPTIRAMGAQQT 928
             .:|...||:         ::|::||.:||::.|::::.::|:..|||.::.|:.|||:. .:|.
plant  1090 -QYAWPTAFFVIPLGWLNIWYRNYYLASSRELTRMDSITKAPIIHHFSESIAGVMTIRSF-RKQE 1152

  Fly   929 LIGQ------YDNYQ-DLHSSGYYTFVSTSRAFGYYLDL-----FCVAYVISVIL-HNFFNPPLH 980
            |..|      .||.: |.|::|      ::...|:.|:|     .|::.:..|:| .|...|.  
plant  1153 LFRQENVKRVNDNLRMDFHNNG------SNEWLGFRLELVGSWVLCISALFMVLLPSNVIRPE-- 1209

  Fly   981 NAGQIGLAITQALGMTGMVQWGMRQSAELENAMTSVERVLEYKDLDPEGDFNSPAEKQPPKSWPK 1045
               .:||:::..|.:..::.:.:..|..:||.|.||||:.::.|:..|.::.. .|..||.:||.
plant  1210 ---NVGLSLSYGLSLNSVLFFAIYMSCFVENKMVSVERIKQFTDIPSESEWER-KETLPPSNWPF 1270

  Fly  1046 EGKLVTKDLSLRYEPDTNSPCVLKGLSFTIQPMEKVGIVGRTGAGKSSLINALFRL-SYNDGAIL 1109
            .|.:..:||.:||.|  |:|.||||::..|:..||||:|||||:|||:||..|||| ..:.|.|:
plant  1271 HGNVHLEDLKVRYRP--NTPLVLKGITLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVEPSGGKII 1333

  Fly  1110 IDSLDTNDIGLHDLRSKISIIPQEPVLFSGTMRYNLDPFEQYPDDKLWKALEDVHLKEEISELPS 1174
            ||.:|.:.:|||||||:..|||||||||.||:|.|:||.|||.|:::||:||...||:.::..|.
plant  1334 IDGIDISTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDVVATKPE 1398

  Fly  1175 GLQSIISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQATIRNKFKDCTVL 1239
            .|.|::.:.|.|:|||||||:||.|.:|:.:|:|.:|||||:||.||||:||..||..|..||::
plant  1399 KLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTII 1463

  Fly  1240 TIAHRLNTIMDSDKVLVMDAGHVVEFGSPYELLTASKAKVFHGMVMQ 1286
            :||||:.|:||.|:|||:|||...||.||..||  .:..:|..:|.:
plant  1464 SIAHRIPTVMDGDRVLVIDAGKAKEFDSPARLL--ERPSLFAALVQE 1508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31793NP_609930.4 CFTR_protein 1..1273 CDD:273530 447/1332 (34%)
ABC_membrane 112..364 CDD:294371 64/262 (24%)
ABCC_MRP_domain1 434..632 CDD:213217 97/198 (49%)
ABC_membrane 736..955 CDD:294371 65/244 (27%)
ABCC_MRP_domain2 1047..1268 CDD:213211 120/221 (54%)
ABCC4NP_182301.1 CFTR_protein 255..1502 CDD:273530 447/1338 (33%)
ABC_membrane 331..595 CDD:294371 67/275 (24%)
ABCC_MRP_domain1 641..841 CDD:213217 97/199 (49%)
ABC_membrane 976..1229 CDD:294371 73/280 (26%)
ABCC_MRP_domain2 1272..1492 CDD:213211 120/221 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2369
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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