DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31793 and abcc6a

DIOPT Version :9

Sequence 1:NP_609930.4 Gene:CG31793 / 326161 FlyBaseID:FBgn0051793 Length:1307 Species:Drosophila melanogaster
Sequence 2:XP_009300481.1 Gene:abcc6a / 566555 ZFINID:ZDB-GENE-050517-18 Length:1507 Species:Danio rerio


Alignment Length:1374 Identity:457/1374 - (33%)
Similarity:719/1374 - (52%) Gaps:168/1374 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PRESAGILSSLMFCFALPILFKGRKQTLQPTDLYKTLNEHEAASLGDEFFQGWEDEVARCRRKGD 74
            |.:.|..||.::|.:...::|||.:..||..||:....|..:..:..:..:.|..:..:.:::.:
Zfish   205 PVQDASFLSKILFWWFSGLIFKGYRSPLQAEDLWSLREEDTSERIISDLEEEWTAKRTKLQQQEN 269

  Fly    75 --------SGRKPS-----------------VLRVIGRVFGWRLIMSGITIAALELGTRATVPLL 114
                    ..|.|.                 :||.:.|.|| ...::|.....:......:||.:
Zfish   270 HMSTSAALGSRLPDQAQLLRKIQKEQSSGFCLLRTLARSFG-PYFLTGTLCLIVHDVFMFSVPQV 333

  Fly   115 LAGLISEFSEHGNGHSYNAQIYAVL--LIACILASVLLTHPYMMGMMHLAMKMRVAVSSAIYRKA 177
            |: |:..|.:..:...:....||.|  |::|:.:  :..|.|......:.|:::.||...:|||:
Zfish   334 LS-LLLGFMKDEDTPLWKGYFYATLMFLLSCLQS--VFNHQYTYTCFTVGMRVKTAVMGLVYRKS 395

  Fly   178 LRLSRTSLGGTTTGQVVNLLSNDLNRFDRCLIHFHFLWLGPLELLIASYFLYEQIGMASFYGISI 242
            |.::.::....|.|::|||:|.|..:....:::|:.:||.|:|:.:..:||::.:|.::..||:.
Zfish   396 LVMNSSARRTCTVGEIVNLVSADTQKLMDFVVYFNAVWLAPIEVTLCLFFLWQHLGPSALAGIAT 460

  Fly   243 LVLYLPLQTYLSRVTSKLRLQTALRTDQRVRMMNEIISGIQVIKMYTWERPFGKLIGQMRRSEMS 307
            ::...||..:::|..|||:.......|.||::||||::||:::|.|.||:.|.:.:...|..|:.
Zfish   461 VIFIFPLNGFIARKRSKLQEIQMKYMDGRVKLMNEILNGIKILKFYAWEKAFLEQVLGYREKELK 525

  Fly   308 SIRQMNLLRGILL------SFEITLGRIAIFVSLLGFVLGGGELTAERAFCVTAFYNILRRTVSK 366
            ::::..:|..:.|      ||.|......::|    .:.....|.|::.|...|..|||:..:|:
Zfish   526 TLKKSQILYSVSLASFNSSSFLIAFAMFGVYV----LIDDKNVLDAQKIFVSMALINILKTPLSQ 586

  Fly   367 FFPSGMSQFAELLVSMRRITNFMMREEANVIDMSERRDEKAEEEQHLLKEVEKRSYPVGIGKEPD 431
             .|..||...:.|||::|:..|:.::|.       :.|..|.|.  ...:|:      |:..:..
Zfish   587 -LPFAMSTTMQALVSLKRLGKFLCQDEL-------KPDNVARES--FKSDVD------GVVFDNG 635

  Fly   432 TLVEIKALRARWGQEQHDLVLNNVNMSLRRGQLVAVIGPVGSGKSSLIQAILGELPPESGSVQVS 496
            |.        .|.::... .|..:::.:..|.||||:|.||||||||:.|:|||....||:|.|.
Zfish   636 TF--------SWSKDGPP-CLKRISVKVPCGSLVAVVGHVGSGKSSLLSAMLGETEKRSGTVSVK 691

  Fly   497 GKYSYASQEPWLFNASVRDNILFGLPMDKQRYRTVLKRCALERDLE-LLHGDGTIVGERGASLSG 560
            |..:|..|:.|:.|||::||||||....:..|:.||:.|||..||: |..||.|.:||:|.:|||
Zfish   692 GSIAYVPQQAWIQNASLQDNILFGREKKESWYQRVLEACALLPDLDNLPAGDATEIGEKGLNLSG 756

  Fly   561 GQRARICLARAVYRRADVYLLDDPLSAVDTHVGRHLFDECM--RGFLGKQLVILVTHQLQFLEDA 623
            ||:.|:.|||||||:.|||||||||||||.|||:|:|::.:  :|.|..:..:||||.:.||..|
Zfish   757 GQKQRVSLARAVYRKGDVYLLDDPLSAVDAHVGQHIFNKVIGPKGILRDKTRVLVTHGMSFLPQA 821

  Fly   624 DLIVIMDKGHVSACGTYEEMLKSGQDFAQLLVESTQNSGGGDEIITSPNLSRQSSALSTKSSNGS 688
            |||:::..|.:|..|:|:|:|.....||             |.|.|..| |.:....|.....||
Zfish   822 DLILVLVDGEISERGSYQELLNRNGAFA-------------DFIHTFAN-SERKECFSEALQRGS 872

  Fly   689 SSSLESMVEKEKPKPSAVSSQESRSG---------------------------------GQIGLS 720
            ..|:...|....|....:|.::...|                                 |::.|.
Zfish   873 RKSVRLSVTDYMPFSRDLSQEQLIGGDTNSIAIEPLPDSDEDHIPEDLGKLTKVDKARIGRVKLE 937

  Fly   721 MYKKYFGAGCGVLVFVVLIMLCIGTQILASGGDYFLSYWVKNTASSST-------LDIY------ 772
            ||.:||.. .|:.:.:.::.|....|..:...:|:||.|......:.|       |.:|      
Zfish   938 MYIEYFRT-IGLPLIISIVFLYAFQQAASLSNNYWLSLWADQPVINGTQLNTDLKLGVYGALGFA 1001

  Fly   773 -------YFTAINVGLVICALLRTLLFFNITMHSSTELHNTMFQGLSRTALYFFHTNPSGRILNR 830
                   ...||::|.:|               :|..||..:...:..:.:.||.:.|||.:|||
Zfish  1002 QGISIFGTTVAISLGCII---------------ASRHLHLDLLNNVLHSPMSFFESTPSGNLLNR 1051

  Fly   831 FANDLGQVDEVMPAVMLDCIQIFLTLTGIICVLCVTNPWYLINTFAMMLAFYYWRDFYLKTSRDV 895
            ||.::..:|.::|..:...:..|..||.:..::.:..|:..:....|:..:.:.:.||:.||..:
Zfish  1052 FAKEIDAIDNMIPDGLKMMLSYFFKLTEVCIIVLMATPFAAVIILPMVFLYGFIQSFYVATSCQL 1116

  Fly   896 KRLEAVARSPMYSHFSATLVGLPTIRAMGAQQTLIGQYDNYQDLHSSGYYTFVSTSRAFGYYLD- 959
            :|||:|:|||:|:|.:.|:.|...|||...|...|...::..|.:.:.|:.....:|..|..|: 
Zfish  1117 RRLESVSRSPIYTHLNETVQGASVIRAFNEQSRFIMGANHKVDHNQTAYFPRFIATRWLGVNLEF 1181

  Fly   960 ----LFCVAYVISVILHNFFNPPLHNAGQIGLAITQALGMTGMVQWGMRQSAELENAMTSVERVL 1020
                :...|.::||:.....:|     |.:|||::.:|.:||.:.|.:|...::||.:.|||||.
Zfish  1182 LGNGIVLAASILSVMAKGTLSP-----GMVGLAVSHSLQVTGFLSWIVRSWTDVENNIVSVERVK 1241

  Fly  1021 EYKDLDPEGDFNSPAEKQPPKSWPKEGKLVTKDLSLRYEPDTNSPCVLKGLSFTIQPMEKVGIVG 1085
            ||.|...|..::......|| |||:.|.:..:|..|:|.....  ..|||:|..|...||:||||
Zfish  1242 EYADTPKEAAWSIEGSSLPP-SWPQTGTIEFQDYGLQYRKGLE--LALKGISVHIHEREKIGIVG 1303

  Fly  1086 RTGAGKSSLINALFR-LSYNDGAILIDSLDTNDIGLHDLRSKISIIPQEPVLFSGTMRYNLDPFE 1149
            |||||||||...:|| |....|.|.||.::..:||||||||:|:||||:||||||::|.|||||.
Zfish  1304 RTGAGKSSLALGIFRILEAAKGEIYIDGINIAEIGLHDLRSRITIIPQDPVLFSGSLRMNLDPFN 1368

  Fly  1150 QYPDDKLWKALEDVHLKEEISELPSGLQSIISEGGTNFSVGQRQLVCLARAILRENRILVMDEAT 1214
            .|.|:::|.|||..|||..:||||..|....||||.|.|:|||||||||||:||:.::||:||||
Zfish  1369 AYSDEEVWNALELAHLKNFVSELPDKLNHECSEGGENLSLGQRQLVCLARALLRKTKVLVLDEAT 1433

  Fly  1215 ANVDPQTDALIQATIRNKFKDCTVLTIAHRLNTIMDSDKVLVMDAGHVVEFGSPYELLTASKAKV 1279
            |.:|.:||.|||:|||::|:||.|||||||||||||..||:|||.|||||..||..|:  :|...
Zfish  1434 AALDLETDTLIQSTIRSQFEDCAVLTIAHRLNTIMDYTKVIVMDKGHVVEMDSPSNLI--AKRGQ 1496

  Fly  1280 FHGMVMQTG 1288
            |:.|..:.|
Zfish  1497 FYYMCREAG 1505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31793NP_609930.4 CFTR_protein 1..1273 CDD:273530 453/1357 (33%)
ABC_membrane 112..364 CDD:294371 70/259 (27%)
ABCC_MRP_domain1 434..632 CDD:213217 95/200 (48%)
ABC_membrane 736..955 CDD:294371 56/238 (24%)
ABCC_MRP_domain2 1047..1268 CDD:213211 131/221 (59%)
abcc6aXP_009300481.1 MRP_assoc_pro 5..1506 CDD:188098 457/1374 (33%)
ABC_membrane 317..584 CDD:279056 71/273 (26%)
ABCC_MRP_domain1 630..831 CDD:213217 96/209 (46%)
ABC_membrane 955..1218 CDD:279056 67/282 (24%)
ABCC_MRP_domain2 1267..1487 CDD:213211 131/221 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586058
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.