DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31793 and haf-2

DIOPT Version :9

Sequence 1:NP_609930.4 Gene:CG31793 / 326161 FlyBaseID:FBgn0051793 Length:1307 Species:Drosophila melanogaster
Sequence 2:NP_495537.2 Gene:haf-2 / 174204 WormBaseID:WBGene00001812 Length:773 Species:Caenorhabditis elegans


Alignment Length:682 Identity:160/682 - (23%)
Similarity:301/682 - (44%) Gaps:112/682 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AGILSSLMFCFALPILFKGRKQTLQPTDLYKTLN---EHEAASLGDEFFQGWED-EVARCRRKGD 74
            :|.:..|::.|..         |..|.|.::.||   |:...|:.:...:...| |.|.....|.
 Worm   130 SGFIQVLVWYFVF---------TSNPFDYHRLLNTTAENAGTSVTETAAETVRDTETASNVESGS 185

  Fly    75 SGRKPSVL-RVIGRVFG-----WRLIMSG---ITIAALELGTRATVPLLLAGLISEFSEHGNGHS 130
            |....:.| :|:.|:..     |....||   :|:.||   .|..:|...|.:||:..   |...
 Worm   186 STAPRAPLHKVLLRLLSYCGHQWPWFASGFVFLTVYAL---ARVFIPNYTAQVISDIV---NKRG 244

  Fly   131 YNAQIYAVLLIACILASVLLTHPYMMGMMHLA-----MKMRVAVSSAIYRKALRLSRTSLGGTTT 190
            ..|.|::::::.|:.|:..|......|....|     :::|:.:.:::.|:.:....|:..|.|.
 Worm   245 IQALIHSIIVLTCLTATSSLFGGLRGGCFDYATALVTLRIRLDLFTSLIRQDIAFYDTAKTGDTM 309

  Fly   191 GQ-------VVNLLSNDLNRFDRCLIHFHFLWLGPLELLIASYFLYEQIGMASFYGISIL-VLYL 247
            .:       :.:.:|.::|.|.|..:    :.:|.|..:|   .:..::.|.:|..:.:: .:..
 Worm   310 SRLTSDCQTISSTVSTNVNVFMRNGV----MLIGALAFMI---LMSWRLAMVTFIAVPLVGFITK 367

  Fly   248 PLQTYLSRVTSKLRLQTALRTDQRVRMMNEIISGIQVIKMYTWERPFGKLIGQMRRSE--MSSIR 310
            ...::..:::.||: ||...|:|   |..|::|.::.::.:..|:.      :::|.|  :||..
 Worm   368 AYSSFYDKISEKLQ-QTIAETNQ---MAEEVVSTMRTVRSFACEKK------ELKRFEDRLSSTL 422

  Fly   311 QMNLLRGILLSFEITLGRI---AIFVSLLGFVLGGGELT----AERAFCVTAFYNILRRTVSKFF 368
            .:|..:.|...|.......   ||.|::|.:   ||.|.    .|:...:|.....::...:.::
 Worm   423 SVNRKKSIAYLFYTWNNEFCDNAILVAVLFY---GGHLVMTGKMEKEQLITFLLYQMQLGENLYY 484

  Fly   369 PS-GMSQFAELLVSMRRITNFMMREEANVIDMSERRDEKAEEEQHLLKEVEKRSYPVGIGKEPDT 432
            .| .||...|.:.:.|::.:.|.|:....:|..:|                    |...|.    
 Worm   485 LSYVMSGLMEAVGASRKVFDLMNRKPQFELDGMQR--------------------PFVNGN---- 525

  Fly   433 LVEIKALRARWGQEQHDLVLNNVNMSLRRGQLVAVIGPVGSGKSSLIQAILGELPPESGSVQVSG 497
             :....:...:....::.||.::.:|::.|:.||::||.|.||||::..|.....|:.|||.:.|
 Worm   526 -ITFSHVGFTYPSRPNNPVLKDLTLSIKSGETVALVGPSGGGKSSIVSLIEHFYEPDEGSVTLDG 589

  Fly   498 -------------KYSYASQEPWLFNASVRDNILFGLPMDKQRYRTVLKRCALERD--LELLHGD 547
                         |.:..:|||.|:|.|||.|||:|.....:.......:.|...|  :||..|.
 Worm   590 VPIKDINHVYYHQKVALVAQEPVLYNGSVRHNILYGCDFATEDDMLNASKMANVHDFVMELEKGY 654

  Fly   548 GTIVGERGASLSGGQRARICLARAVYRRADVYLLDDPLSAVDTHVGRHLFDECMRGFLGKQLVIL 612
            .|..||:|..:||||:.||.:|||:.|...|.:||:..||:||. ...|..:.:.....::.||:
 Worm   655 DTNCGEKGVQMSGGQKQRIAIARALVRNPAVLILDEATSALDTE-SEALVQQALSRCAQERTVII 718

  Fly   613 VTHQLQFLEDADLIVIMDKGHVSACGTYEEML 644
            |.|:|..:|.|:.|.::.||.:...||:.|::
 Worm   719 VAHRLSTIEKANKIAVIVKGCLVQMGTHTELM 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31793NP_609930.4 CFTR_protein 1..1273 CDD:273530 160/682 (23%)
ABC_membrane 112..364 CDD:294371 52/273 (19%)
ABCC_MRP_domain1 434..632 CDD:213217 67/212 (32%)
ABC_membrane 736..955 CDD:294371
ABCC_MRP_domain2 1047..1268 CDD:213211
haf-2NP_495537.2 3a01208 15..761 CDD:273363 160/682 (23%)
ABC_membrane 215..478 CDD:279056 56/288 (19%)
ABC_MTABC3_MDL1_MDL2 526..764 CDD:213216 72/226 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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