DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and SCARB2

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_005497.1 Gene:SCARB2 / 950 HGNCID:1665 Length:478 Species:Homo sapiens


Alignment Length:497 Identity:141/497 - (28%)
Similarity:230/497 - (46%) Gaps:46/497 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CCGVTQQKAWVFGLGTFFAVSGLLAIICWPGFIDSGIMKALPLTPTSKTFEKWEELPIPVYVYMY 69
            ||..|   |....|........||....:...:|..|.|.:.|...::.|:.||:.|:|||...|
Human     4 CCFYT---AGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFY 65

  Fly    70 LWNWTNAADVQANGVKPIFAQLGPYVYREERKKMDLEWHDNG-TVTFNPRRTWFWEEELS-GGKQ 132
            .:|.||..:: ..|..|...::|||.|||.|.|.::::.||| |::....:.:.:|.:.| |..:
Human    66 FFNVTNPEEI-LRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPK 129

  Fly   133 TDLITAPHLPSLAASNQMRNSNV-FLKFMFNEALNANGGHLFVTHTAAEWLFESFYDEFLHYAMT 196
            .|||...::|.|..   :..|.| ||:.:....|.|....||||||..|.|: .:.||.|    :
Human   130 IDLIRTLNIPVLTV---IEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLW-GYKDEIL----S 186

  Fly   197 LNNPLVPKIESDHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKGQNHTGWY-DGECGRL 260
            |.:...|.| |.:|..|..:||:.|  |.:...||........:|..|.|:....|: ..:|..:
Human   187 LIHVFRPDI-SPYFGLFYEKNGTND--GDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMI 248

  Fly   261 NGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQGITGWKY----EITPNTFDNGQIN 321
            ||:..|.|.|...|::.|.:|..|.||.:.:.|: ..|::||:..::|    ||..||.||..  
Human   249 NGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFS-DYESVQGLPAFRYKVPAEILANTSDNAG-- 310

  Fly   322 GNAKCWCPLERQPDNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPNYDQNNFYI 386
                 :|..|   .||..:|..::..|.:|.|:.:|..||..|||.:.|.|.|.:||.:.:..::
Human   311 -----FCIPE---GNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFV 367

  Fly   387 IMERKMGVPLKVNANVMITLYIEP-DSVIDILKGLPSFYAPLFTTASRAEIDEALASELRLALNL 450
            .:....|:.||......|.:|::. |..:: ...:.:...|:........||:..||.|:..:|.
Human   368 DINPLTGIILKAAKRFQINIYVKKLDDFVE-TGDIRTMVFPVMYLNESVHIDKETASRLKSMINT 431

  Fly   451 PAIGRYTGVGFLCLGCILIAVGILLTIKRKWY---GQAELDK 489
            ..|  .|.:.:     |::|:|:...:...|.   ||..:|:
Human   432 TLI--ITNIPY-----IIMALGVFFGLVFTWLACKGQGSMDE 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 132/463 (29%)
SCARB2NP_005497.1 CD36 28..455 CDD:307331 130/457 (28%)
Important for interaction with GBA 155..191 14/40 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.920

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