DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaD and scarb2b

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_009299911.1 Gene:scarb2b / 564077 ZFINID:ZDB-GENE-170406-1 Length:523 Species:Danio rerio


Alignment Length:532 Identity:139/532 - (26%)
Similarity:241/532 - (45%) Gaps:50/532 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CCS-CCGVTQQKAWVFGLGTFFAVSGLLAIICWPGFIDSGIMKALPLTPTSKTFEKWEELPIPVY 65
            ||. .||.......:.|:..|  .|||...:     |.:.:.|.:.||..||.|..|:..|.|||
Zfish     6 CCMYSCGAAGALLLLAGIALF--ASGLFQTL-----IHNKLKKEITLTEGSKVFATWKNPPPPVY 63

  Fly    66 VYMYLWNWTNAADVQANGVKPIFAQLGPYVYREERKKMDLEWHDNGT--VTFNPRRTWFWEEELS 128
            :..:.:|.||.........|...:::|||.|||.|.|.::.:.||||  ..:.|:...|..|:..
Zfish    64 MEFFFFNVTNPEAFLKGEAKARLSEMGPYTYREYRPKHNVSFVDNGTKVAAYTPKVFVFVPEKSV 128

  Fly   129 GGKQTDLITAPHLPSLAASNQMRNSNVFLKFMFNEALNANGGHLFVTHTAAE--WLFESFYDEFL 191
            |....|::|..::|::|..|:::.:...:....:..:.:.|..:|:|||..|  |.|:       
Zfish   129 GDPSVDMVTTVNIPAVAVMNRIKGAGFLVSSAMSLYMKSIGAEMFMTHTVDELLWGFK------- 186

  Fly   192 HYAMTLNNPLVPKIES------DHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKGQN-H 249
                   :||:.|:.|      :.|...|::|||.|  |.|..|||..:..:.|.|..|||:. .
Zfish   187 -------DPLLTKLRSIKPETDEFFGLMLHKNGSDD--GEFVYHTGEHNYLDYGRIFTWKGEKLM 242

  Fly   250 TGWYDGECGRLNGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQGITGWKYEITPNT 314
            :.|...:...:||:....|.|...||:.|.:|..|.||.|::.|..:.| ::||..:::......
Zfish   243 SFWKTNQSNMINGTDGSAFHPFLTKEERLDVFTADLCRSIHMRFEKEVE-VKGIPAYRFTPPRAV 306

  Fly   315 FDNGQINGNAKCWCPLERQPDNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPNY 379
            ..:|..|...:.:|   ..|..|...|..|:..|..|.|:.:|..||...||.|...:.|.:|.:
Zfish   307 LASGTNNPENEGFC---LTPKKCLDDGVLDVSVCRQGAPVVVSFPHFHLGDEKYVQAVEGLSPVH 368

  Fly   380 DQNNFYIIMERKMGVPLKVNANVMITLYIEPDSVIDILKGLPSFYAPLFTTASRAEIDEALASEL 444
            :|:..::.:...||||::......|.:::|..:...:.:.|.|...|:........||.|.|..:
Zfish   369 EQHQTFLDLNPTMGVPVRAMKRAQINIHLERVTGFPMTRNLESTIFPIIFLNESVVIDNASAERI 433

  Fly   445 RLALNLPAIGRYTGVGFLCLGCILIAVGILLTIKRKWYGQAELDKL---------ALKDNEETPY 500
            :..|.:..:..:..:..:.||.||:.|.::|.: |.:..:.|:.:.         |....::|.|
Zfish   434 QKLLLVVTLVSHFPLILVALGVILLIVAVILAV-RYYQNKTEVKRFDFAEAFHCTAPSAKKDTSY 497

  Fly   501 EPEVPANVVERN 512
            .| |.|.|.:::
Zfish   498 AP-VSAKVDDQD 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 124/465 (27%)
scarb2bXP_009299911.1 CD36 30..463 CDD:279474 121/457 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.020

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