DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and cd36

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001002363.1 Gene:cd36 / 436636 ZFINID:ZDB-GENE-040718-55 Length:465 Species:Danio rerio


Alignment Length:498 Identity:128/498 - (25%)
Similarity:217/498 - (43%) Gaps:63/498 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SCCGVTQQKAWVFG--LGTFFAVSGLLAIICWPGFIDSGIMKALPLTPTSKTFEKWEELPIPVYV 66
            :||  .|:.|.:.|  ||...|:.|.:.|......|.:.:.|...|...:..|:.|..:.|.:|.
Zfish     2 TCC--DQRCALITGAVLGALIALLGGILIPVGDMIIKNTVHKETVLENGTLAFDTWTSVDIAMYR 64

  Fly    67 YMYLWNWTNAADVQANGVKPIFAQLGPYVYREER-KKMDLEWHDNGTVTFNPRRTWFWEEELSGG 130
            ..:::|..|...|.:.|.||:..|.|||.||... .|.::.::||.||:|.......:|..:|.|
Zfish    65 QFWIFNVENPDKVLSEGSKPVLVQKGPYTYRVRYIPKTNITFNDNNTVSFVLPAGATFEPSMSVG 129

  Fly   131 KQTDLITAPHL----------PSLAASNQMRNSNVFLKFMFNEALNANGGHLFVTHTAAEWLFES 185
            .:.|:.|:.:|          |.||                :..:.::|..||...|..|.|: .
Zfish   130 SEEDVFTSLNLAVAGVYRLIGPKLA----------------DWLIRSSGSSLFQNRTVKELLW-G 177

  Fly   186 FYDEFLHYAMTLNNPLVPKIESDHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKGQNHT 250
            :.|..|       |.||        ..|...||:.|  ||:||.||..||.::..|:.|:|:...
Zfish   178 YKDPML-------NSLV--------GAFYPYNGTVD--GPYTVFTGKDDINKVAIIERWQGETSV 225

  Fly   251 G-WYDGECGRLNGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQGITGWKYEITPNT 314
            . |.|..|.::|||....|.|...|::.|..|.||.||.|:.|:.. :..::||..::|.:..:.
Zfish   226 NYWNDSYCDKINGSDGSSFHPFLDKKEPLYFFSPDICRSISAEYEA-TVNLKGIDVYRYLLPVDA 289

  Fly   315 FDNGQINGNAKCWCPLERQPDNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPNY 379
            ..:...|.:..|:|.......||...|..|:..| .|.|:::|..||:||.......:.|.|||.
Zfish   290 LASPVSNPDNMCYCTDHEITRNCTLAGLLDITSC-KGTPVFISLPHFLYASIELQQGVVGMNPNL 353

  Fly   380 DQNNFYIIMERKMGVPLKVNANVMITLYIEPDSVIDILKGLPSF-YAPLFTTASRAEIDEALA-- 441
            |:::.::.:|...|..|:.:..:.:.:...|...|.:|..:... ..|:......|.:|:..|  
Zfish   354 DEHSIFLDVEPITGFTLRFSKRLQVNMMYGPSDDIALLNKIKEHTIIPILWLNETAVLDDETAKM 418

  Fly   442 --SELRLALNL---PAIGRYTGVGFLCLGCILIAVGILLTIKR 479
              :||...:::   ..||.......:.|||:   :|:::...:
Zfish   419 FKNELISRMDMLEGLQIGLLVTGSAIFLGCM---IGLIVVCSK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 122/474 (26%)
cd36NP_001002363.1 CD36 17..450 CDD:279474 121/471 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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