DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and scarb1

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_017213428.1 Gene:scarb1 / 387260 ZFINID:ZDB-GENE-031126-1 Length:511 Species:Danio rerio


Alignment Length:503 Identity:137/503 - (27%)
Similarity:240/503 - (47%) Gaps:33/503 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LGTFFAVSGLLAIICWPGFIDSGIMKALPLTPTSK-TFEKWEELPIPVYVYMYLWNWTNAADVQA 81
            ||....:.|.:.:...|..||..|:|.:.:.|.:. ::..|:::|:|.::.:|.::..|..:: .
Zfish    14 LGGMALLFGTVLVFVGPIIIDDQIVKNVEINPKNDLSYTMWKDIPVPFFMSVYFFHIVNPDEI-L 77

  Fly    82 NGVKPIFAQLGPYVYREERKKMDLEWHDNGTVTFNPRRTWFWEEELSGGKQTDLITAPHLPSLAA 146
            .|.:|:..|.|||||||.|.|.::.:|:|.||::...|.:|:||.:|.|.::|::|.|::..|.|
Zfish    78 KGERPMVIQRGPYVYRENRWKDNITFHENHTVSYKEYRQYFFEESMSVGDESDVVTIPNMLVLGA 142

  Fly   147 SNQMRNSNVFLKFMFNEALNANGGHLFVTHTAAE--WLFESFYDEFLHYAMTLNNPLVPKI--ES 207
            |..|.|....::.:.:..........|:|....|  |.::|...:||       |..:|.:  .|
Zfish   143 SVMMENMPFPVRLLLSTTFKTFNEGPFLTKPVGELMWGYDSKLVDFL-------NKYLPGMLPSS 200

  Fly   208 DHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKG-QNHTGWYDGECGRLNGSTTDLFVPD 271
            ..|..|.:.|.|.  .|.||:.||..||:::..:..|.| :|...|...:|..:||:...::.|.
Zfish   201 GKFGLFADFNNSN--TGLFTIFTGRDDIRKVHMVDSWNGLKNVDYWRSDQCNMINGTAGQMWPPF 263

  Fly   272 EPKEKALTIFIPDTCRIINLEFTGQSETI-QGITGWKYEITPNT-FDNGQINGNAKCWCPLERQP 334
            ..||..:..:.||.||  ::|...|...: .||..::| ::|.| |.||......:.:||     
Zfish   264 MTKETTMPFYSPDACR--SMELVYQRPLVSSGIPVYRY-VSPKTLFANGADFPPNEGFCP----- 320

  Fly   335 DNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPNYDQNNFYIIMERKMGVPLKVN 399
              |..:|..::..|..|.|.::|..||..||.....|:||.:|:.|::..:|.:..:.|||:.|:
Zfish   321 --CRQSGLLNVSSCRHGSPTFISQPHFYNADPQLLDTVSGLSPSEDEHGLFIDIHPETGVPVNVS 383

  Fly   400 ANVMITLYIEPDSVIDILKGLPSFYAPLFTTASRAEIDEALASELRLAL-NLPAIGRYTGVGFLC 463
            ..:.:.|:::..|.|.....:.....|:........||..:....|..| .||.:..|....|:.
Zfish   384 VRLQLNLFLKKVSGISETGNIAEVVMPMLWFEESGYIDGPVLHTFRTNLVVLPKVMEYMQYIFIA 448

  Fly   464 LG--CILIAVGILLTIKRKW--YGQAELDKLALKDNEETPYEPEVPAN 507
            ||  .||.||.:.||.|:.|  ..|.....::.:..:...:..:.|||
Zfish   449 LGLAAILTAVILFLTDKKVWKKSSQTLTQAVSTRVYDNVNHSKQHPAN 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 128/465 (28%)
scarb1XP_017213428.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582132
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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