DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and CG3829

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster


Alignment Length:526 Identity:114/526 - (21%)
Similarity:221/526 - (42%) Gaps:67/526 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LGTFFAVSGLLAIICWPGFI--------DSGIMKALPLTPTSKTFEKWEELPIPVY---VYMYLW 71
            ||..|    ||.:|...||.        ::.|::.|.|...|.|...|.. |.|.|   :..:::
  Fly    87 LGVMF----LLFVISVTGFFVMWFTEYYNNTILENLILAENSDTANSWLN-PDPKYDTLLKAHIF 146

  Fly    72 NWTNAADV---QANGVKPIFAQLGPYVYREERKKMDLEWHDNGTVTFNPRRTWFWEEELSGGKQT 133
            ::.|..|.   :|:.:|.:  .:||..|:|...|.::.::.|.||:|..|:::.:..|.|...:.
  Fly   147 HYPNIDDYLAGRADKIKVV--DVGPLTYQEHTVKDEVSFNKNFTVSFRDRKSYKFLPEKSSIGEH 209

  Fly   134 DLITAPHLPSLAASNQMRNSNVFLKFMFNEALNANGGHLFVTHTAAEWLFESFYDEFLHYAMTLN 198
            :::..|::|.::|:..::....|.:...:..:......||...|.:|:|: .:.|..:       
  Fly   210 EVVRVPNVPLISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLW-GYEDSII------- 266

  Fly   199 NPLVPKIES-----DHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKGQNHTGWYDG-EC 257
                 |::|     ..|...::|||:.  .....::||..||.:...|..:.|.....:::| ||
  Fly   267 -----KLKSLGRGRRRFGLLMSRNGTS--VDSVQLNTGEDDITKFSIITQFNGMPQLDYWEGDEC 324

  Fly   258 GRLNGSTTDLFVPDEPKEKA-LTIFIPDTCRIINLEFTGQSETIQGITGWKYEITPNTFDNGQIN 321
            .|::||...:|.|...:::: :.:|:...||.:.|.|..:......|...:|....:.|.:...|
  Fly   325 NRIDGSEPSMFSPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKN 389

  Fly   322 GNAKCWCPLERQPDNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPNYDQNNFYI 386
            ...:|:|   :..:.|..:|..:...|....|::.|..||...|........|..|:...:..|.
  Fly   390 PANQCYC---QNTELCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYA 451

  Fly   387 IMERKMGVPLKVNANVMITLYIEPDSVI----DILKG---LPSFYAPLFTTASRAEIDEALASEL 444
            .:..:.|.|:...:.|.|.:.::...::    |.||.   ||..:..:    :..:..|.:...|
  Fly   452 DIHPRFGFPISGASRVQINIMLDKTPILRNQGDRLKNTTILPLMWIEI----TSGDFSEEVLHTL 512

  Fly   445 RLA-LNLPAIGRYTGVGFLCLGCI---LIAVGI-LLTIKRKWYGQ-----AELDKLALKDNEETP 499
            .|: ..|.||.:....|.|.:...   ||..|: .|..:|:...|     |||:.|...:|....
  Fly   513 YLSTFGLNAIQQTLKYGTLLISVTSFSLIVAGVYYLNSRREQQLQESKTSAELEALNGGENVIVV 577

  Fly   500 YEPEVP 505
            :..::|
  Fly   578 HHIDMP 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 104/487 (21%)
CG3829NP_001286874.1 CD36 91..546 CDD:279474 103/483 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450722
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
65.850

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