DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and pes

DIOPT Version :10

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_609168.2 Gene:pes / 34087 FlyBaseID:FBgn0031969 Length:555 Species:Drosophila melanogaster


Alignment Length:515 Identity:148/515 - (28%)
Similarity:254/515 - (49%) Gaps:55/515 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCCSCCGVTQQKAWVFGLGTFFAVSGLLAIICWPGFIDSGIMKALPLTPTSKTFEKWEELPIPVY 65
            :||...|:...:.|:   ..|..:.|                :.:.|:|.|::||.|:..|:|:.
  Fly    18 ICCIASGIYLFRNWI---DMFTRMRG----------------QEMALSPNSRSFEGWKVSPLPLD 63

  Fly    66 VYMYLWNWTNAADVQ-ANGVKPIFAQLGPYVYREERKKMDLEWHD-NGTVTFNPRRTWFWEEEL- 127
            ..:||:||||..|.. .:..||.|.|||||.:||:..|:|:|||: |.:|:|: :::||:.:.. 
  Fly    64 FDIYLFNWTNPDDFYVGSNKKPHFEQLGPYRFREKPDKVDIEWHNHNASVSFH-KKSWFYFDAAG 127

  Fly   128 SGGKQTDLITAPHLPSLAASNQMRNS-NVFLKFMFNEALNANGGHLFVTHTAAEWLFESFYDEFL 191
            |.|...|.:|.  :.|:|.|...|.: :.|.:...|.|.......:.:|.|..|.||:.:...|:
  Fly   128 SNGSLWDKVTT--VNSVAHSAARRAAVDWFARTGVNIANKLYRQGVTITKTVDEMLFKGYEHPFI 190

  Fly   192 HYAMTLNNPLVP-KIESDHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKGQNHTGWYDG 255
            .....|....|| |....|:.    ||||.:|:|...:.||..||.:||:|..|....|||.::|
  Fly   191 SVGKLLRPQDVPYKRIGYHYP----RNGSSEFDGDINMFTGADDIAKMGQIHTWNNLTHTGAFEG 251

  Fly   256 ECGRLNGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQGITGWKYEITPNTFDNGQI 320
            .||:::||..:.|.|:...:..:.:::|..||.|.|::. ::.|:.|:|.:|:..|.:..|||.:
  Fly   252 TCGQVHGSMGEFFPPNLGTKDTVYMYMPKMCRAIPLDYV-ETVTVHGVTAYKFSGTRHAVDNGTL 315

  Fly   321 NGNAKCWCPLERQPDNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPNYDQNNFY 385
            ..:.:|:|    ....|..:|..::|||:....:|:|..||..||.||...|.|..|..:::.|:
  Fly   316 YPDTRCYC----VGGKCMPSGVINIGPCSFNASVYMSFPHFYMADPSYLEAIEGLRPEREKHEFF 376

  Fly   386 IIMERKMGVPLKVNANVMITLYIEPDSVIDILKGLPSFYAPLFTTASRAEIDEALASELRLALNL 450
            :.:|...|||:.|........|:||...|.:.:.:|:...|:.....|..:.|.:|:::.|...:
  Fly   377 MALEPNAGVPMDVGGGFQANYYMEPIPGITLYENVPTVMIPMMWCEERVRVSEEIAADIALVPLI 441

  Fly   451 PAIGR-YTGVGFLCLGCILIAVGILLTIKRKWYGQAELDKLALKDNEETPYEPEVPANVV 509
            ..:|: .||        ||:|.|::.|.   ||...::......|       |:..|:|:
  Fly   442 VLLGQIVTG--------ILLAGGLICTC---WYPTRQVTHFCHSD-------PKAKASVL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 17..476 CDD:460076 137/464 (30%)
pesNP_609168.2 CD36 15..463 CDD:460076 142/486 (29%)

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