DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and scav-4

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_510157.2 Gene:scav-4 / 181429 WormBaseID:WBGene00008692 Length:560 Species:Caenorhabditis elegans


Alignment Length:561 Identity:127/561 - (22%)
Similarity:208/561 - (37%) Gaps:152/561 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VFGLGTFFAVSGLLAIICWPGFIDSGI---MKALPLTPTSKTFEKWEELP-IPVYVYMYLWNWTN 75
            ||.||.|..:...:||  :...:||.:   .|:....||...:  |.::| :.::.: :|:|.||
 Worm    16 VFALGIFLLIPFPIAI--FQSIVDSQVYLQQKSDGQLPTGTFY--WSKIPAVQIWTF-HLFNVTN 75

  Fly    76 AADVQANGVKPIFAQLGPYVYREERKKMDLEWHDN-GTVTFNPRRTWFWEEELS--GGKQTDLIT 137
            ..:|...|..|...::|||.|.|...|...::.|| ..:.:...:||.::...|  ..|.:|   
 Worm    76 PDEVLYYGATPNMLEIGPYTYTETEFKDFTQFRDNDNEIFYVNNKTWVYDPTRSCEDCKLSD--- 137

  Fly   138 APHLPSLAASNQMRNSNVFLKFMFNEALNANGGHLFV-----------THTAAEWLFESFYDEFL 191
                 |:..:|....|.||:: ::..|....|..|.|           |.||...||:.:.|..:
 Worm   138 -----SVQFANTAYMSTVFMQ-IYQPAGPIVGFGLDVLTILLGEQPLRTVTAGGTLFDGYNDPLI 196

  Fly   192 HYAMTLNNPLV-------------PKIES----DHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMG 239
               ..:|:|||             |::.:    .|:        |...:|.:|:.||..:...:|
 Worm   197 ---TLINSPLVKVLLSVLGNPVQLPQVPAAGFFPHY--------SHTCDGNYTIRTGKDNTDYVG 250

  Fly   240 EIKYWKGQNHTGWYDGECGRLNGSTTDL--------FVPDEPKEKALTIFIPDTCRIINLEFTGQ 296
            :||.|.|..|..|:..|      .|:||        ..|...|...:..|....||..||.: .:
 Worm   251 QIKTWNGLTHLPWWKTE------DTSDLRGTCDGTIQKPGIQKTDTVVQFQSFLCRKYNLHY-HE 308

  Fly   297 SETIQGITGWKYEITPNTFD---------------------------NGQINGNAKCWCPLE--R 332
            |:|:..|..:.:::..:::|                           ..|.|||    |.|.  .
 Worm   309 SKTVNSIPTYGFKVEDDSYDAIKNPGYRYENFEKVNYFPNWPCGLNHTKQNNGN----CALVDCN 369

  Fly   333 QPDN-CPATGATDLGPCADG-------------VPM--------------YLSADHFMYADESYG 369
            |.|| |.|        |.||             ||.              .|||.||..|.:...
 Worm   370 QYDNFCNA--------CCDGSHVNGTYVMPPGMVPQRCLPGQMVPTPFGAILSAPHFYGAPKVVT 426

  Fly   370 STISGYNPN---YDQNNFYIIMERKMGVPLKVNANVMITLYIEPDSVIDILKGLPSFYAPLFT-T 430
            .::.|.:|:   :....|||  ....|..:.....:|:::.:.......::...|:...|.|| |
 Worm   427 ESMVGIHPDPELHRPGTFYI--NPATGSTIGGEFRMMLSIPVFQSLAWTLMSNAPNAIMPSFTLT 489

  Fly   431 ASRAEIDEALASELRLALNLPAIGRYTGVGFLCLGCILIAV 471
            ......|.|:.......:.:|.|....|:||..:.  ||||
 Worm   490 IGVVMKDYAVNYIYFNTVTIPNIVLGLGIGFTAVS--LIAV 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 124/557 (22%)
scav-4NP_510157.2 CD36 11..533 CDD:279474 127/561 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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