DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and scav-5

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_509651.2 Gene:scav-5 / 181200 WormBaseID:WBGene00011076 Length:536 Species:Caenorhabditis elegans


Alignment Length:547 Identity:117/547 - (21%)
Similarity:202/547 - (36%) Gaps:121/547 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FGLGTFFAVSGL-LAIICWP------------GFIDSGIM---KALPLTPTSKTFEKWEELPIPV 64
            |.:..||.:||| :.|..||            |..|.|.:   ..|...|..|...|:.      
 Worm    12 FVIAAFFFLSGLSMWIAFWPIFNSELRSNYKLGANDDGSLHYAAFLYANPPMKNVMKFN------ 70

  Fly    65 YVYMYLWNWTNAADVQANGVKPIFAQLGPYVYREERKKMDLEWHDNGTVTFNPRRTWFWEEEL-- 127
                 |:|.||..:|:..|.||...::|.|.:.|..:|...|:..:.|..|......:...|:  
 Worm    71 -----LFNVTNPDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVDN 130

  Fly   128 -SGGKQTDLITAPHLPSLAASNQMRNSNVF---------LKFMFNEALNANGGHLFVTHTAAEWL 182
             :|....|.|..|:  |:|   :...|.||         .|.:.:..|...|.:.|::.|..:.|
 Worm   131 DAGYNYNDKIMFPN--SIA---EGAVSTVFGPQSEFSPTAKILVSIGLVMLGEYPFISKTVKDVL 190

  Fly   183 FESFYD---------------EFLHYAMTLNNPLVPKIESDHFAWFLNRNGSKDFEGPFTVHTGV 232
            .:.:.|               .|..|...||  .:|::::  ||:....|.|  ::..:.::||.
 Worm   191 MDGYEDPLLSVAHSGIFISLVNFYGYGSQLN--YIPEMKT--FAYLSGYNNS--YDENYWINTGY 249

  Fly   233 GDIKEMGEIKYWKGQNH---TGWYDGECGRLNGSTTDLFVPDE--------PKEKALTIFIPDTC 286
            .|..::|.::.|.|...   :.|...|..::.|       ||.        .|...|..|:...|
 Worm   250 NDFNKLGFVESWAGLEQLPASFWPTLEARQIKG-------PDSGSLSKIHLTKTDELPFFLSFMC 307

  Fly   287 RIINLEFTGQSETIQGITGWKYEITPNTFDNGQINGNA----KCWCPLERQPDNCPATGATDLGP 347
            |.....: .|...:.||....:.:....||. .:..||    |....::..||.|.....|.|..
 Worm   308 RSFKRTY-WQDGLVDGIKTMAFAVPYEEFDT-TLEKNAGFRYKNQENVDYFPDWCDKNTTTSLSQ 370

  Fly   348 C---ADGV----------------------PMYLSADHFMYADESYGSTISGYNPNYDQNNFYII 387
            |   |:|.                      .:.:|..||:|:.......:||.||:.:::...:.
 Worm   371 CQKTANGTFLLPPGIFPLVCYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDPEKHKPMVF 435

  Fly   388 -MERKMGVPLKVNANVMITLYIEPDSVIDILKGLPSFYAPLFTTASRAEIDEALASELRL-ALNL 450
             .|:..|..|:|:....:.|.:..:....:...:|:...|||...|.|.:.:.:...:.| .:.:
 Worm   436 HQEKTSGTALQVDVRFQVNLPVVNNKGSIMSSQMPNVIIPLFYEDSHALVKDFVMDTVWLGVIIV 500

  Fly   451 PAIGRYTGVGFLCLGCILIAVGILLTI 477
            |.|     :.:|....|.|::.||.|:
 Worm   501 PRI-----IEYLKFVLIFISICILTTL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 113/539 (21%)
scav-5NP_509651.2 CD36 15..524 CDD:279474 116/544 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.876977 Normalized mean entropy S6407
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.870

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