DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and scav-1

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_508919.2 Gene:scav-1 / 180812 WormBaseID:WBGene00015389 Length:563 Species:Caenorhabditis elegans


Alignment Length:572 Identity:131/572 - (22%)
Similarity:211/572 - (36%) Gaps:125/572 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CSC---CGVTQQKAWVFGLGTFFAVSGLLAII-CWPGFIDSGI--MKALPLTP--TSKTF-EKWE 58
            |.|   .|:      :|.:|....|:||:.:: .:|..:::.|  .|.|.|..  |..:| :.|.
 Worm     6 CICQVSAGI------IFLIGAALLVAGLVIVLNVFPNIVNNQINDSKVLGLNADGTLNSFTDSWV 64

  Fly    59 ELPIPVYVYMYLWNWTNAADVQANGVKPIFAQLGPYVYREERKKMDLEWHDNG---------TVT 114
            .......:..:::::||...:....:.|...:.|||.:.|......|.:.:||         |..
 Worm    65 NSKYISTMQYWVYDYTNTIGIMNRAIYPDVREKGPYAFDEILTMDKLNFSENGEFMEFRQIQTFV 129

  Fly   115 FNPRRTW-----FWEEEL-------SGGKQTDLITAPHLPS-LAA------------SNQ-MRNS 153
            |||.::.     :.::.|       .|..|.|.:....|.: |||            :|| ..|.
 Worm   130 FNPNKSCAGCDPYKDKVLIPDMGFQVGIDQIDTVIEGILKNPLAATICHAIMKGKPNANQTCSNL 194

  Fly   154 NVFLKFMFNEALNANGGHLFVTHTAAEWLF--------ESFYDE---FLHYAM-TLNNPL-VPKI 205
            ...::......::......|.|.|..:.||        |.|.||   .||:.. |...|| .|.|
 Worm   195 GALIEGELGTLISLFNVSPFTTVTVDQLLFSGYKTPFVEKFLDEALGMLHFLFGTAPKPLDDPPI 259

  Fly   206 ESDHFAWFLN-RNGSKDFEGPFTVHTGVGDIKEMGEI---------------------KYWKGQN 248
            :       || .||:.|...  ||.||..|..:.|.:                     .:|...|
 Worm   260 Q-------LNPLNGTSDIIN--TVLTGKTDPLKAGYMTEFRSISNNSLFNSIGNTLPPMWWPYAN 315

  Fly   249 HTGWYDGECGR-LNGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQGITGWKYEITP 312
            .|...|..... |.|:..|.|.....|...|..|:.|.||.|:..| .:..|::|..|:::.:.|
 Worm   316 KTYCKDPNSALVLTGTNGDYFKNFVKKTDILPAFVSDVCRTIHFVF-DREVTVKGFKGYRFVMPP 379

  Fly   313 NTFDNGQINGNAKCWCPLERQPDNCPA------TGATDLGPCADGVPMYLSADHFMYADESYGST 371
            ..||. .::.|.....||:......||      :|..|:..|..| |:.:|..||..|.:.....
 Worm   380 TQFDY-SLDENCGYCIPLKYGSYEYPAQSACLPSGLLDISQCTGG-PIIMSKPHFYQASKVVSKF 442

  Fly   372 ISGYNPNYDQNNFYIIMERKMGVPLKVNANVMITL------YIEPDSVIDILKGLPSFYAPLFTT 430
            :..:.|.||.:...:.:|...|..|:....:.|.:      :|...||:     .|..| ||...
 Worm   443 VPRFKPTYDNDETMLDIEPNTGTVLQAQKRLQINMLVNQFKHIRSYSVM-----RPGAY-PLAWV 501

  Fly   431 ASRAEIDEALASELRLALNLPAIGRYTGVGFLC-----LGCILIAVGILLTI 477
            .....:|:....:|...|..|.    :.|..:|     ||..|||:.|::.|
 Worm   502 NESFYMDQNTIDQLNSQLFTPV----STVNTICWIAVGLGAGLIALSIVMVI 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 125/548 (23%)
scav-1NP_508919.2 CD36 19..546 CDD:279474 125/548 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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