DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaD and scav-2

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_499802.3 Gene:scav-2 / 176787 WormBaseID:WBGene00013578 Length:558 Species:Caenorhabditis elegans


Alignment Length:558 Identity:129/558 - (23%)
Similarity:223/558 - (39%) Gaps:82/558 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SCCGVTQQKAWVFGLGTFFAVSGLLA-IICWPGFIDSGIMKALPLTPTSKTFEKWEELPIPVYVY 67
            |||.:. ..|.:.|||:|.....|:. .:..|..:.|.|.:...|...|..:|||......:...
 Worm    30 SCCQLV-ISAVLIGLGSFLLFGSLITHTVVVPKVVKSSIEENSRLVNGSIMWEKWAMPEYKIRFN 93

  Fly    68 MYLWNWTNAADVQANGVKPIFAQLGPYVYREERKKMD--LEWHDNGTVTFNPRRTWFWEEELSGG 130
            ||::: |...|...||..|.....||||:   .|||:  :...:||||.:....|:.:.|:.|  
 Worm    94 MYVYS-TKNPDEFMNGAIPEVTGSGPYVF---DKKMENRVVSAENGTVKYRRFFTYNFNEQES-- 152

  Fly   131 KQT----DLITAPHLPSLAASNQMRNSNVFLKFMFNEALNANG----GHLFVTHTA------AEW 181
            .||    :.|..|::             ::.||:  ||.:..|    ....::.||      .|.
 Worm   153 CQTCILGNRIWVPNM-------------IYQKFV--EAASTEGMKAAATTLLSQTAFLEVEVEEL 202

  Fly   182 LFESFYDEFLHYAMTLNNPL----------VPKIESDHFAWFLNRN--GSKDFEGPFTVHTGVGD 234
            |||.:.|.||.....:  |.          ||    :....|...|  |||.:|    :..|..:
 Worm   203 LFEGYKDPFLDKVCEI--PFMNFVCEAILDVP----ERIGLFFKANGTGSKVYE----IDDGTRN 257

  Fly   235 IKEMGEIKYWKGQ---NHTGWYDGECGRLNGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQ 296
            ..::|:|..:...   :.|.|...|..::.|:...||.|...|.:.|.:::.:.||.|.|||..:
 Worm   258 PDDLGKILSYDESPILDETWWSTDESLKIKGTDGSLFHPFLSKHEKLYVYVAELCRSIWLEFKEE 322

  Fly   297 SETIQGITGWKYEITPNTFD------NGQINGNAKCWCPLERQPDNCPATGATDLGPCADG-VPM 354
            .| .:|:..:::.:.|..||      .|..|.:.|.:...:....||...|..::..|... .|:
 Worm   323 VE-YRGLKAYRFVVPPEVFDVTHPGNQGFCNPSEKQFYESQNDSSNCMPKGLLEISKCQQSQPPI 386

  Fly   355 YLSADHFMYADESYGSTISGYNPNYD-QNNFYIIMERKMGVPLKVN--ANVMITLYIEPDSVIDI 416
            .:|..:|::|......::.|.|...: :::..:.:|.::|..|...  :.|.|.::...:....:
 Worm   387 TISLPNFLFAPSEVRGSVKGLNETDEIRDSIVVDIEPRVGAVLYARRVSQVNIEMWKGKNLTFPV 451

  Fly   417 -LKGLPSFYAPLFTTASRAEIDEALASELRLALNLPAIGRYTGVG-FLCLGCILIAVGIL----- 474
             ||.:.|...|:......:|||:....::|..|.......||... .:.:|.|::.:|.|     
 Worm   452 NLKKMKSALIPVLILHETSEIDDDSLEQIRSQLYETESIAYTSCDVMMIIGAIMLLLGFLFLSFS 516

  Fly   475 LTIKRKWYGQAELDKLALKDNEETPYEPEVPANVVERN 512
            |.:.....|:.......|......||.|:...|....|
 Worm   517 LGLCDPILGRRSKRANGLSPEPLPPYVPKGEPNGYHHN 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 114/498 (23%)
scav-2NP_499802.3 CD36 46..505 CDD:279474 111/490 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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