DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ninaD and scav-3

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_499625.2 Gene:scav-3 / 176673 WormBaseID:WBGene00013039 Length:534 Species:Caenorhabditis elegans


Alignment Length:549 Identity:124/549 - (22%)
Similarity:221/549 - (40%) Gaps:87/549 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VFG----LGTFFAVSGLLAIICWPGFIDSGIMKAL--------------PLTPTSKTFEKWEELP 61
            :||    ||...|.:|:|.:|..|  ||..:.:.:              ...|.:.| :.|.:  
 Worm     8 LFGSAIILGLLLAAAGVLLLIGIP--IDRIVNRQVIDQDFLGYTRDENGTEVPNAMT-KSWLK-- 67

  Fly    62 IPVY---VYMYLWNWTNAADVQANGVKPIFAQLGPYVYREERKKMDLEWHDNGTVTF--NPRRTW 121
             |:|   :.::::|.||...:.....||...::||:|:.|.::|:...:.||.|..|  |.:...
 Worm    68 -PLYAMQLNIWMFNVTNVDGILKRHEKPNLHEIGPFVFDEVQEKVYHRFADNDTRVFYKNQKLYH 131

  Fly   122 FWEEELSGGKQTDL-ITAPHL--PSLAASNQMRNSNVFLKFMFNEALNANGGHLFVTHTAAEWLF 183
            |.:.........|: :|.|::  ..|..:..:....|.:||.....|.......::|...::.||
 Worm   132 FNKNASCPTCHLDMKVTIPNIVFQKLIDAADVTIFGVRIKFAIESVLKMVSEAPYITVKVSDALF 196

  Fly   184 ESFYDEFLHYA--------MTLNNPLVPKIESDHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMGE 240
            :.:.|..:...        :...|.|..::     .:|..:||:.|  |.:.|..||....::|.
 Worm   197 DGYEDPIIDIVCKNKILQFLCETNSLQRRV-----GFFYGQNGTTD--GIYEVDAGVPSPSKIGH 254

  Fly   241 IKYWKGQNH--TGWYDGECGR-LNGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQG 302
            :..|.....  .|.:|.:..| :||:...||.|...:|..||||:|..||.|.:|:| :...:.|
 Worm   255 LYTWNNMTEMPEGTWDTKYARMINGTDGQLFSPMLKREDRLTIFVPQICRSIQMEYT-KDVAVNG 318

  Fly   303 ITGWKY--------------------EITPNTFDNGQINGNAKCWCPLERQPDNCPATGATDLGP 347
            :..|:|                    ...|..|||..:            |.:||...|..||..
 Worm   319 VPSWRYAPPLDLYDPALPQNRAFCNKNGMPRYFDNTTV------------QIENCLPAGLIDLSR 371

  Fly   348 CADGVP-MYLSADHFMYADESYGSTISGYNPNYDQNNFYII-MERKMGVPLKVNANVMITLYIEP 410
            |..|.| :|||..||..:......:::|.:.....|:..:: :|...|||.:....:.|.:.:..
 Worm   372 CQAGNPRVYLSNPHFYNSPMELWHSVTGLSVPTASNDLTVVDIEPTAGVPTQAKRIMQINVGMVK 436

  Fly   411 DSVIDILKGLPSFYAPLFTTASRAEIDEALASELRLALNLPAIGRYTGVGFLCLGCIL-IAVGIL 474
            .| :.:.:...:...|:......|..|:....:|....|........||..|.||.|. :||.::
 Worm   437 GS-LSVTENTTNVVVPVLWMNETAYFDQGTRDQLINIFNAKHYSFIGGVISLSLGLIAWLAVFVV 500

  Fly   475 LTIKRKWYGQAELDKLALKDNEETPYEPE 503
            :.:..:...:.|..:|.|:|.:|.|.:.|
 Worm   501 IIVYSRQSDEEEYGRLVLEDEDEEPAQDE 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 114/510 (22%)
scav-3NP_499625.2 CD36 52..499 CDD:279474 106/471 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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