DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and Snmp2

DIOPT Version :10

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_061505615.1 Gene:Snmp2 / 1276390 VectorBaseID:AGAMI1_007822 Length:577 Species:Anopheles gambiae


Alignment Length:553 Identity:130/553 - (23%)
Similarity:233/553 - (42%) Gaps:116/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 WVFGLGTFFAVSG-LLAIICWPGFIDSGIMKALPLTPTSKTFEKWEELPIPVYVYMYLWNWTNAA 77
            |. |:|...|||| ||..:.:|..:...:::|..|...:..:::||.||.|:...:|::|.||..
Mosquito     8 WA-GIGAMMAVSGALLGWVVFPRAVHEKVIEATELRQGTDQYKRWEALPQPLDFKVYIFNVTNPY 71

  Fly    78 DVQANGVKPIFAQLGPYVYREERKKMDLEW-HDNGTVTFNPRRTWFWEEELSGG-KQTDLITA-- 138
            :|. .|.:|...::|||||.:.|:|.::.: .|...|.|:.::.:.::.|.|.. .:.|.:|.  
Mosquito    72 EVM-QGRRPKVVEVGPYVYFQYRQKDNVRFSRDRSKVHFSQQQMYVFDAESSYPLTENDELTVLN 135

  Fly   139 PHLPSL--AASNQMRN---------SNVFLKF--------------------------------M 160
            .|:.|:  ...||.:.         :|...|.                                :
Mosquito   136 MHMNSILQIIDNQAKETITNFRSDVNNTLEKIPVVRVIKRIIERTTPIQSILQIAEDETYDSLRL 200

  Fly   161 FNEALNANGGH---LFVTHTAAEWLFESFYDEFLHYAMTLNNPLVPKIE-------------SDH 209
            .|..||...|.   :|:..|..::||:..  .|....:.:...:..:||             |..
Mosquito   201 INVELNRIFGRPDTMFLRTTPKQFLFDGV--PFCVNVIGIAKAICKEIEKRNTKTIRTMPDGSLR 263

  Fly   210 FAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKGQ-------NHTGWYDGECGRLNGSTTDL 267
            |::|.::|.:.|  |.||::||:.|......|:.|.|:       |.:......|.:::|:....
Mosquito   264 FSFFSHKNMTDD--GMFTINTGIKDPSRTQMIELWNGRTTLDVWNNRSSGLSSSCNKIHGTDGSG 326

  Fly   268 FVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQGITGWKYEITPN-TFDNGQINGNAKCWCPLE 331
            :.|.....:.:|||..|.||.::::.|| |.:.:||...:|||..| ..:.|...|| .|:| :.
Mosquito   327 YPPFRTGVERMTIFSTDICRTVDIKLTG-SSSYEGIPALRYEIDNNFLHEIGPEYGN-DCYC-VN 388

  Fly   332 RQP------DNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPNYDQNNFYIIMER 390
            :.|      :.|...||.||..|.| .|:.|:..|.:...|.|.:.|.|.:|..:::..::.:|.
Mosquito   389 KIPKSIVKSNGCLYKGALDLSNCFD-APVVLTLPHMLGVAEEYTALIDGMDPEPERHQIFVDVEP 452

  Fly   391 KMGVPLKVNANVMITLYIEPDSVIDILKGL-PSFYAPLFTTASRAEIDEALA----------SEL 444
            ..|.||.....|...:::.....|.:...| |:.:..::       |||.:|          ..|
Mosquito   453 YTGTPLNGGKRVQFNMFLRRIDAIKLTDRLQPTLFPVIW-------IDEGIALNEDMVKLIDDSL 510

  Fly   445 RLALNLPAIGRYTGVGFLCLGCILIAVGILLTI 477
            ...|:|..:.::          :||.||:||.:
Mosquito   511 MKVLSLLDVVQW----------VLIGVGLLLAV 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 17..476 CDD:460076 128/547 (23%)
Snmp2XP_061505615.1 None

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