DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and Snmp1

DIOPT Version :10

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:XP_061500418.1 Gene:Snmp1 / 1273513 VectorBaseID:AGAMI1_007246 Length:542 Species:Anopheles gambiae


Alignment Length:463 Identity:107/463 - (23%)
Similarity:198/463 - (42%) Gaps:49/463 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CGVTQQKAWVFGLGTFFAVSGLLAIICWPGFIDSGIMKALPLTPTSKTFEKWEELPIPVYVYMYL 70
            ||:      ||..|.|            |..:...|.:.:.|.|.::..:.:|::|.|:...:::
Mosquito    23 CGM------VFSYGIF------------PSILRFMIKQNVLLKPGTQIRDMFEKIPFPLDFKLHI 69

  Fly    71 WNWTNAADVQANGVKPIFAQLGPYVYREERKKMD-LEWHDNGTVTFNPRRTWFWEEELSGGKQTD 134
            :|.||..::...| ||....:||..:.|.::|.| ::..:..|:||..|.||.:..:||.....:
Mosquito    70 FNVTNPDEIMRGG-KPRVNDIGPLYFEEWKEKYDTVDNVEEDTLTFTLRNTWIFRPDLSALTGEE 133

  Fly   135 LITAPHLPSLAASNQMRNSNVFLKFMFNEALNANGGHL---FVTHTAAEWLFESFY-----DEF- 190
            ::|.||...:.....::.....:..:..:.:|.....|   |:.....:.||:..|     .:| 
Mosquito   134 IVTIPHPLIMGVLLMVQRDREAMMPLVKKGVNILFDPLESAFLKVRIMDLLFDGIYVDCSSQDFA 198

  Fly   191 ---LHYAMTLNNPLVPKIESDH-FAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKGQNHTG 251
               |...|.....::|..|:.: |::|..||.::  .|.:.|:.||.:|:::|.:..:..:....
Mosquito   199 AKALCSGMDSEGAVMPHNETHYKFSFFGMRNHTE--AGRWVVYRGVKNIRDLGRVVSYNEETEMD 261

  Fly   252 WYDG-ECGRLNGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQGITGWKYEITPNTF 315
            .:|| ||.:..|:.:.:|.|....:..|..:.|:.||.:...:..:|         ||...|.::
Mosquito   262 IWDGDECNQYIGTDSTIFPPFLTAQDRLWAWSPEICRSLGAHYVHKS---------KYAGLPMSY 317

  Fly   316 ---DNGQINGNAKCWCPLERQPDNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNP 377
               |.|.:.......|.....||:||..|..||.||..| |:..|..||..||......:.|..|
Mosquito   318 FELDFGDLKNEPHNHCFCRDAPDDCPPKGTMDLSPCLGG-PIIGSKPHFYGADPKLVEAVDGLAP 381

  Fly   378 NYDQNNFYIIMERKMGVPLKVNANVMITLYIEPDSVIDILKGLPSFYAPLFTTASRAEIDEALAS 442
            |...::.||..|...|.|:.....:..::.:.|....::...||....|:|.....|.:::...:
Mosquito   382 NKAAHDVYIHFELFTGSPVSAAKRLQFSMELGPIRDHELFGQLPDVILPMFWAEEGASLNKTWTN 446

  Fly   443 ELRLALNL 450
            :|:..|.|
Mosquito   447 QLKYQLFL 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 17..476 CDD:460076 103/452 (23%)
Snmp1XP_061500418.1 None

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