DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaD and cd36

DIOPT Version :9

Sequence 1:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001107151.1 Gene:cd36 / 100135002 XenbaseID:XB-GENE-493679 Length:470 Species:Xenopus tropicalis


Alignment Length:493 Identity:132/493 - (26%)
Similarity:224/493 - (45%) Gaps:44/493 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCCSCCGVTQQKAWVFGLGTFFAVSGLLAI---ICWP---GFIDSGIMKALPLTPTSKTFEKWEE 59
            ||||      .|.|:. :|:  .:.|||||   |.:|   ..|:..|.....:...:..:|.|.|
 Frog     1 MCCS------TKCWLI-VGS--VIGGLLAILGGILFPVGDMIINKEISTEAVIEEGTIAYENWIE 56

  Fly    60 LPIPVYVYMYLWNWTNAADVQANGVKPIFAQLGPYVYR-EERKKMDLEWHDNGTVTFNPRRTWFW 123
            ...|||.:.::::.||..:: .||.|||..|.|||.|| ....|.::...:|.||::.......:
 Frog    57 AGSPVYRHFWIYHVTNPDEI-INGGKPILQQKGPYTYRVRYLPKENITQLENNTVSYWQPNGAIF 120

  Fly   124 EEELSGGKQTDLITAPHLPSLAASNQMRNSNVFLKFMFNEALNANGGHLFVTHTAAEWLFESFYD 188
            :.|.|.|.:.|..|..:| ::||:..|..:   |:.:.|..:.::...||...:..|.|: .:.|
 Frog   121 QREGSYGPEEDTYTVLNL-AVAAAPAMFPA---LQGLLNAIIKSSNSSLFQVRSVKELLW-GYRD 180

  Fly   189 EFLHYAMTLNNPLVPKIESDHF----AWFLNRNGSKDFEGPFTVHTGVGDIKEMGEI-KYWKGQN 248
            .||.           ||..|..    ..|...||:.|  |.:.|:.|.|||.::..| :|.:.:.
 Frog   181 PFLE-----------KIPIDSIDKTTGLFYPNNGTAD--GIYHVYNGKGDISKVAIIDRYKEAKA 232

  Fly   249 HTGWYDGECGRLNGSTTDLFVPDEPKEKALTIFIPDTCRIINLEFTGQSETIQGITGWKYEITPN 313
            ...|.|..|..:||:....|.|...|:|.|..|..:.||.|...|. :...::||..:::.:|.:
 Frog   233 LPYWNDDFCDMINGTDAASFPPSVKKDKRLYFFSSEICRSIYGIFE-KEYMVKGIKLYRFVVTED 296

  Fly   314 TFDNGQINGNAKCWCPLERQPDNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPN 378
            ...:...|.:..|:|...:...||.|.|..||..|..|.|::||..||:||.:....::||..||
 Frog   297 AMASPTKNPDNHCFCKDFQLSRNCTAAGVLDLRSCQGGKPIFLSLPHFLYASDYLLDSVSGLKPN 361

  Fly   379 YDQNNFYIIMERKMGVPLKVNANVMITLYIEPDSVIDILKGLPS-FYAPLFTTASRAEIDEALAS 442
            .:::..||.:|...|..:.....:.:.:.|:|...|:::..|.| ...|:......|.|.:..|:
 Frog   362 KEEHETYIDVEPITGFTMHFAKRLQVNVMIQPTDKIEVMSKLQSELVFPVAWLNETALIGDDSAN 426

  Fly   443 ELRLALNLP-AIGRYTGVGFLCLGCIL-IAVGILLTIK 478
            ..:..:..| .:.....:..||:|.:: :|..|.|.::
 Frog   427 MFKSKVTTPMKVVEILRIVLLCVGSVVFLACSITLCVR 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaDNP_724087.1 CD36 19..474 CDD:279474 124/469 (26%)
cd36NP_001107151.1 CD36 16..459 CDD:366481 123/462 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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