DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rngo and DDI2

DIOPT Version :9

Sequence 1:NP_001285328.1 Gene:rngo / 32616 FlyBaseID:FBgn0030753 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_115717.3 Gene:DDI2 / 84301 HGNCID:24578 Length:399 Species:Homo sapiens


Alignment Length:393 Identity:195/393 - (49%)
Similarity:264/393 - (67%) Gaps:25/393 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FCLDVAQDLELENLKALCAMEIGAEVSQIAVIFNGRELSSDKQTLQQCGVGDGDFIMLERRRSAN 77
            |.|.|..|.||.|.:|||.:|.|...::..:::..|.|:.:.::|...|:.|||.::|.::.:|:
Human    17 FSLQVDADFELHNFRALCELESGIPAAESQIVYAERPLTDNHRSLASYGLKDGDVVILRQKENAD 81

  Fly    78 -RPVGGNPAISTLDFSNIAVPGTSSGGSPPSRRVQQQGVQQPQFN--NLTDIPTTDEFNVNFDDD 139
             ||....|.:..:|||:||||||||    |.:| |..|.||...:  .:|..|       ...|:
Human    82 PRPPVQFPNLPRIDFSSIAVPGTSS----PRQR-QPPGTQQSHSSPGEITSSP-------QGLDN 134

  Fly   140 PETVRQMFLSSPETLSLLRQYNPSLAEAIDSGDKEKFARLLREHITERKRRNEHRMRMLNADPFD 204
            |..:|.|.|::|..||||::.||.||||:.|||.|||:|:|.|...:|.||.:.|:|:.:|||||
Human   135 PALLRDMLLANPHELSLLKERNPPLAEALLSGDLEKFSRVLVEQQQDRARREQERIRLFSADPFD 199

  Fly   205 EETQRLIAEEIKQKNIQDNMAAAIEYNPEIFGTVTMLYINCKVNGIPVKAFVDSGAQTTIMSKDC 269
            .|.|..|.|:|:|:||::||..|:|..||.||.|.||||||||||.|||||||||||.||||:.|
Human   200 LEAQAKIEEDIRQQNIEENMTIAMEEAPESFGQVVMLYINCKVNGHPVKAFVDSGAQMTIMSQAC 264

  Fly   270 AERCHVNRLIDTRWNGVAKGVGTQPILGRIHMVQLQIENDHLTSSFTVLGQQPMDMLLGLDMLKR 334
            ||||::.||:|.||.|:|||||||.|:||:|:.|:|||.|.|..||::|.:||||||||||||||
Human   265 AERCNIMRLVDRRWAGIAKGVGTQKIIGRVHLAQVQIEGDFLPCSFSILEEQPMDMLLGLDMLKR 329

  Fly   335 HQCLIDLQRNLLIIGTTGTTTPFLPESELPVSARLTGNS-------EDSMEQ---EAISNAIEQS 389
            |||.|||::|:|:|||||:.|.||||.|||..|||...:       |:..:|   ||:..:.|.:
Human   330 HQCSIDLKKNVLVIGTTGSQTTFLPEGELPECARLAYGAGREDVRPEEIADQELAEALQKSAEDA 394

  Fly   390 KRE 392
            :|:
Human   395 ERQ 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rngoNP_001285328.1 UBQ 1..73 CDD:214563 20/59 (34%)
DDI1_N 3..72 CDD:176391 20/58 (34%)
RP_DDI 225..344 CDD:133146 83/118 (70%)
UBA 411..445 CDD:279021
DDI2NP_115717.3 Ubl_Ddi1_like 1..76 CDD:340494 20/58 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 99..134 16/46 (35%)
RP_DDI 221..343 CDD:133146 85/121 (70%)
Ubiquitin-binding. /evidence=ECO:0000305|PubMed:27461074 376..395 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147166
Domainoid 1 1.000 185 1.000 Domainoid score I3384
eggNOG 1 0.900 - - E1_KOG0012
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H121661
Inparanoid 1 1.050 358 1.000 Inparanoid score I2227
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54960
OrthoDB 1 1.010 - - D495103at33208
OrthoFinder 1 1.000 - - FOG0002352
OrthoInspector 1 1.000 - - otm40502
orthoMCL 1 0.900 - - OOG6_101685
Panther 1 1.100 - - O PTHR12917
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2086
SonicParanoid 1 1.000 - - X1784
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.