DRSC/TRiP Functional Genomics Resources

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Protein Alignment rngo and Rsc1a1

DIOPT Version :9

Sequence 1:NP_001285328.1 Gene:rngo / 32616 FlyBaseID:FBgn0030753 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_076033.4 Gene:Rsc1a1 / 69994 MGIID:3526447 Length:582 Species:Mus musculus


Alignment Length:518 Identity:107/518 - (20%)
Similarity:159/518 - (30%) Gaps:205/518 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CLDVAQDLELENLKALCAMEIGAEVSQIAVIFNGRELSSDKQTLQQCGVGDGDFIMLERRRSANR 78
            ||..|:||||..           ||..:..:..|                       |.:|.|:.
Mouse   183 CLCDAEDLELHE-----------EVVSLEALRKG-----------------------ELQRHAHL 213

  Fly    79 PVG--GNPA--------------ISTLDFSNIAVPGTSSGGSPPSRRVQQQGVQQPQFNNL-TDI 126
            |..  |.||              :.|.:.|.:|:  .||.|.      |...::.|...:| :|.
Mouse   214 PSAEKGLPASGLCSCPCSEALMEVDTAEQSLVAM--CSSTGR------QDAVIKSPSVAHLASDN 270

  Fly   127 PTTDEFNVNFDDDPETVRQMFLSSPETLSLLRQYNPSLAEAIDSGDKEKFARLLREH--ITERKR 189
            ||.:                    .|||    |.||| .|.:             ||  :|...:
Mouse   271 PTME--------------------VETL----QSNPS-CEPV-------------EHSILTRELQ 297

  Fly   190 RNEHRMRMLNADPFDEETQRLIAEEIKQKNIQDNMAAAIEYNPEIFGTVT--------MLYINCK 246
            ..|..:.|...|..|:.:..|::         .:...::|...|...:||        :|.|:||
Mouse   298 LPEDNVDMSTMDNKDDNSSSLLS---------GHGQPSVESAEEFCSSVTVALKELHELLVISCK 353

  Fly   247 VNGIPVKAFVDSGAQTTIMSKDCAE---------------------------RCHVNRLIDTRWN 284
                  .|..:|....|..|:..||                           .||.    .|..:
Mouse   354 ------PASEESPEHVTCQSEIGAESQPSVSDLSGRRVQSVHLTPSDQYSQGSCHQ----ATSES 408

  Fly   285 GVAKGVGTQPILGRIHMVQLQIENDHLTSSFTVLGQQPMDMLLGL-----DMLK-----RHQCLI 339
            |..:.|||.|...        :| |..::||..||.       ||     |:.:     |..|.:
Mouse   409 GKTEIVGTAPCAA--------VE-DEASTSFEGLGD-------GLSPDREDVRRSTESARKSCSV 457

  Fly   340 DLQRNLLIIGTTGTTTPFLP-ESELPVSARLTGN-SEDSMEQEAISNAIEQSKRESG---GAG-- 397
            .:        |:...:..|| .|.:.::..|..: ...|...|.:.|........|.   |||  
Mouse   458 AI--------TSAKLSEQLPCTSGVEIAPELAASEGAHSQPSEHVHNPGPDRPETSSVCPGAGLP 514

  Fly   398 ----GGPNT-------ISPQERFTEQDVTDLMALGYPRSDVLTVLRLCGGNKQAARSVLLHRN 449
                ..|.|       :.|...|...||..::..|:...:.|..|...|||...|..|||.:|
Mouse   515 RSGLDQPPTQSLSTPSVLPPFIFPAADVDRILGAGFTLQEALGALHRVGGNADLALLVLLAKN 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rngoNP_001285328.1 UBQ 1..73 CDD:214563 11/58 (19%)
DDI1_N 3..72 CDD:176391 10/57 (18%)
RP_DDI 225..344 CDD:133146 33/163 (20%)
UBA 411..445 CDD:279021 9/33 (27%)
Rsc1a1NP_076033.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..180
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..325 4/30 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 363..384 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 390..409 3/22 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 426..452 7/32 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..529 9/45 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101685
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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