DRSC/TRiP Functional Genomics Resources

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Protein Alignment rngo and LOC105945772

DIOPT Version :9

Sequence 1:NP_001285328.1 Gene:rngo / 32616 FlyBaseID:FBgn0030753 Length:458 Species:Drosophila melanogaster
Sequence 2:XP_031748089.1 Gene:LOC105945772 / 105945772 -ID:- Length:204 Species:Xenopus tropicalis


Alignment Length:79 Identity:21/79 - (26%)
Similarity:28/79 - (35%) Gaps:20/79 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 EQSKRESGGAGGGPNTISPQER-------FTEQDVTDLMALGYPRSDVLTVLRLCGGNKQAARSV 444
            :..|||....|   :.|..|:|       |..||..||:.|..        ||..|.:|......
 Frog    12 DSPKREKDLRG---SAILHQQRRLKQATQFVHQDSADLLPLDQ--------LRRLGTSKDLQPHS 65

  Fly   445 LLHRNDAASGSELS 458
            ::.|.  ..|..||
 Frog    66 VIQRR--LMGGSLS 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rngoNP_001285328.1 UBQ 1..73 CDD:214563
DDI1_N 3..72 CDD:176391
RP_DDI 225..344 CDD:133146
UBA 411..445 CDD:279021 9/33 (27%)
LOC105945772XP_031748089.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12917
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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