DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31773 and Nphs1

DIOPT Version :9

Sequence 1:NP_722953.1 Gene:CG31773 / 326159 FlyBaseID:FBgn0051773 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_062332.2 Gene:Nphs1 / 54631 MGIID:1859637 Length:1256 Species:Mus musculus


Alignment Length:584 Identity:112/584 - (19%)
Similarity:199/584 - (34%) Gaps:180/584 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVLPLMYRRRSSHLKALQWTIQS-SQNFFKMSFKAP---SIKVPKAAAIKELANKPTQPQS---- 59
            |.|.|:.:|..:   .|..|.:: |..|.|.:||..   ::|.|   |.|.....|.:.||    
Mouse   414 SNLTLLVKREDN---GLSLTCEAFSDAFSKETFKKSLTLNVKYP---AQKLWIEGPPEGQSIRTG 472

  Fly    60 --------------QPSQSQSSATQPTQPPQQAEIKKNPLTMGAISPAPPT-------PISPKPS 103
                          :||.:....::|...|:|:: :...:.:|::..:..|       .|.|   
Mouse   473 TRVRLVCLAIGGNPEPSLTWLKDSRPVNDPRQSQ-EPRRVQLGSVEKSGSTFSRELVLIIGP--- 533

  Fly   104 VQPKIPDQRAKWMAKVSPESQRKAKLAAAGGSPPSGPPKNQFSQANNPSFAMPGQS---SPANFS 165
                 ||..||:..|.       .:|:|:.......||.|....||: |...||.:   :..:.|
Mouse   534 -----PDNLAKFSCKA-------GQLSASTQLVVQFPPTNLTILANS-SALRPGDALNLTCVSIS 585

  Fly   166 AAPKTQASWQ---QKVEKSAENEDSGAFKG-ASSESQRKNWMNRMQGSQQ--RKQNQWLKE---- 220
            :.|....|..   ::::..|....|..||| |:|.|......:|..|.:.  |..::.|:|    
Mouse   586 SNPPVNLSLDKEGERLDDVAAKPQSAPFKGSAASRSVFLRVSSRDHGHRVTCRAHSEALRETVSS 650

  Fly   221 ------MQAKQQAGKDIQA-QKMQKMESQKATTTPAAPPKEAAPST-----PQPAEKP------- 266
                  :...:..|:.::| ..:::.::....:..|.|..||...|     ..||..|       
Mouse   651 FYRLNVLYPPEFLGEQVRAVTVVEQGQALLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILSG 715

  Fly   267 ----------------------EEKSPEHLAYLDAIKQLNSYQVLEPTS---GRATTKSSRKEQD 306
                                  .|.:.|.|..||.........:.:||.   |.:.......:.:
Mouse   716 GALQLWNVTRADDGFYQLHCQNSEGTAEALLKLDVHYAPTIRALKDPTEVNVGGSVDIVCTVDAN 780

  Fly   307 PVIEQTLECLEKSGLTKKDLKAIPVIQVA-GSKGR-----------GSTCAIVESILRCHGVKTG 359
            |::.:... .|:.|..:::|....:.::: ||.||           |:...||:     :||...
Mouse   781 PILPEMFS-WERLGEDEEELNLDDMEKMSKGSTGRLRIRQAKLSQAGAYQCIVD-----NGVAPA 839

  Fly   360 VLSSPHLFL----------------------TSERIRIDGEPLSDVQFTELFWKINTDLANMQPT 402
            ......|.:                      :|..:......:.::.||   |..|....::| .
Mouse   840 ARGLVRLVVRFAPQVDHPTPLTKVAAAGDSTSSATLHCRARGVPNIDFT---WTKNGVPLDLQ-D 900

  Fly   403 PSYNKIMTVMAFHAFHQAGVEVAILEVGNAGA----------------SDATNIASHAQTIGIT 450
            |.|.:       |.:||..|..::|.:.|..|                ||.|||    |.:.|:
Mouse   901 PRYTE-------HKYHQGVVHSSLLTIANVSAAQDYALFKCTATNALGSDHTNI----QLVSIS 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31773NP_722953.1 folC 309..745 CDD:273659 35/192 (18%)
Nphs1NP_062332.2 Ig 52..128 CDD:299845
IG_like 52..127 CDD:214653
C2-set_2 155..242 CDD:285423
Ig 254..332 CDD:299845
IG_like 268..350 CDD:214653
C2-set_2 358..440 CDD:285423 8/28 (29%)
Ig 459..544 CDD:299845 16/93 (17%)
I-set 460..555 CDD:254352 19/110 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 491..516 4/25 (16%)
Ig 563..646 CDD:299845 20/83 (24%)
IG_like 670..750 CDD:214653 12/79 (15%)
Ig 676..750 CDD:299845 12/73 (16%)
Ig_3 753..834 CDD:290638 14/86 (16%)
IG_like 762..848 CDD:214653 17/91 (19%)
Ig 848..956 CDD:299845 22/121 (18%)
IG_like 859..949 CDD:214653 20/104 (19%)
fn3 956..1039 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1048..1071
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1112..1143
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.