DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31759 and cnot6a

DIOPT Version :10

Sequence 1:NP_723735.2 Gene:CG31759 / 326158 FlyBaseID:FBgn0051759 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_068071884.1 Gene:cnot6a / 324048 ZFINID:ZDB-GENE-030131-2768 Length:572 Species:Danio rerio


Alignment Length:459 Identity:125/459 - (27%)
Similarity:206/459 - (44%) Gaps:99/459 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 QYLVTPEDIG--YHLKFVVTPGNALGMTG-PVVEKITNSAVQESPG----------------RCP 219
            |..|.|.::|  :.|:       .||:.| |:.::|.| ..||..|                |.|
Zfish   123 QLRVLPFELGKLFQLQ-------TLGLKGNPLAQEILN-LYQEPDGTRRLLNYLLDNLAGTKRAP 179

  Fly   220 FQDRQRHTTNSLSESNEIR------VVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFI 278
            .:.....:...|.|.:..|      |:.||:|.|.||:..     |:.|||:..|..:|||...:
Zfish   180 IEQPPPRSWIPLQEPDRTRPAALFSVMCYNVLCDKYATRQ-----LYGYCPSWALNWEYRKKSIM 239

  Fly   279 NEIIGYNSDILCLQEVD-QRIFDFDLKEILEQPPYNYHGIMAPKG----------KCAEGVAIFF 332
            .||:..::||:.||||: ::.:::.|.|:.||   .|.|..:||.          |..:|.|:|:
Zfish   240 QEILSCSADIISLQEVETEQYYNYFLLELKEQ---GYEGFFSPKSRARTMSESDRKHVDGCAVFY 301

  Fly   333 RNSRFDLLDSQILHL---------GSNIPALPVFESLWNKI--KVNAQLAERICERSTTLQTCLL 386
            :..:|.|:....:..         ||        |::.|::  |.|..:|..:..|...::....
Zfish   302 KTDKFSLVQKHTVEFNQLAMANSEGS--------EAMLNRVMTKDNIGVAVLLELRKEMMELSAG 358

  Fly   387 R-IKGTD-NYVLVANTHLYFHPDADHIRLLQMGFSMLF---VEQSISKAIKDFNISSHKN----I 442
            : :.|.: ..:||||.|:::.|:...::|:|   :|:|   |:..:.||.:...:||...    |
Zfish   359 KPLHGMEKQLLLVANAHMHWDPEYSDVKLVQ---TMMFLSEVKNIVDKATRSLKLSSVSGETNAI 420

  Fly   443 GLIFCGDFNSVPECGI------------YKLMTEQLAEKTLEDWQSNAEQAVSNVELAQPFKMAS 495
            .|:.|.|.||:|:.|:            :|...|.....:|.::..|.:...|:..:...||:.|
Zfish   421 PLVLCADLNSLPDSGVVEYLSTGGVDGAHKDFKELRYIDSLTNFNCNGKNGTSSTRITHGFKLKS 485

  Fly   496 AY--GAPEYTHYTTLFAGCLDYVFYQNDRFEVLKVV-PLPTEEELKAN-TAIPSAVFPSDHVALV 556
            ||  |...||:||..|.|.:||:||......||.|: ||.....|:.| |..|....||||.:|.
Zfish   486 AYENGLMPYTNYTFDFKGIIDYIFYSQPLLNVLGVLGPLEHHWLLENNVTGCPHPHIPSDHFSLF 550

  Fly   557 ADLK 560
            |.|:
Zfish   551 AQLE 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31759NP_723735.2 EEP 239..561 CDD:469791 106/369 (29%)
cnot6aXP_068071884.1 LRR <54..>147 CDD:443914 8/30 (27%)
leucine-rich repeat 68..90 CDD:275378
leucine-rich repeat 91..105 CDD:275378
EEP 205..555 CDD:469791 106/369 (29%)
Blue background indicates that the domain is not in the aligned region.

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