DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31759 and Cnot6

DIOPT Version :10

Sequence 1:NP_723735.2 Gene:CG31759 / 326158 FlyBaseID:FBgn0051759 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001277670.1 Gene:Cnot6 / 104625 MGIID:2144529 Length:557 Species:Mus musculus


Alignment Length:471 Identity:121/471 - (25%)
Similarity:203/471 - (43%) Gaps:123/471 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 QYLVTPEDIG--YHLKFVVTPGNALGMTGPVVEKITNSAVQESPGRCPFQDRQRHTTN------- 229
            |..|.|.::|  :.|:.:...||      |:.:.|.|        .|...|..|...|       
Mouse   108 QLRVLPFELGKLFQLQTLSLKGN------PLTQDILN--------LCLEPDGTRRLLNYLLDNLS 158

  Fly   230 -----------------SLSESNEIR------VVSYNLLADLYASSDYAGSTLFSYCPAKYLQID 271
                             .|.|.:..|      |:.||:|.|.||:..     |:.|||:..|..|
Mouse   159 GTAKRISTEQPPPRSWIMLQEPDRTRPTALFSVMCYNVLCDKYATRQ-----LYGYCPSWALNWD 218

  Fly   272 YRKPLFINEIIGYNSDILCLQEVD-QRIFDFDLKEILEQPPYNYHGIMAPKG----------KCA 325
            |||...|.||:..|:||:.||||: ::.:.|.|.|:.|:   .|:|..:||.          |..
Mouse   219 YRKKAIIQEILSCNADIISLQEVETEQYYSFFLVELKER---GYNGFFSPKSRARTMSEQERKHV 280

  Fly   326 EGVAIFFRNSRFDLLDSQILHLGSNIPALPVFESLWNKIKV-NAQLAERICERSTTLQ----TCL 385
            :|.||||:..:|.|:....:.              :|::.: |::.:|.:..|..|..    ..|
Mouse   281 DGCAIFFKTEKFTLVQKHTVE--------------FNQLAMANSEGSEAMLNRVMTKDNIGVAVL 331

  Fly   386 LRIK-------------GTD-NYVLVANTHLYFHPDADHIRLLQMGFSMLFVEQ------SISKA 430
            |.::             ||: ..:||||.|:::.|:...::|:|   :|:|:.:      ..|::
Mouse   332 LELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEYSDVKLVQ---TMMFLSEVKNIIDKASRS 393

  Fly   431 IKDFNISSHKNIGLIFCGDFNSVPECGI------------YKLMTEQLAEKTLEDWQSNAEQAVS 483
            :|...:.....|.|:.|.|.||:|:.|:            :|...|....::|.::..|.:..::
Mouse   394 LKSSVLGECGTIPLVLCADLNSLPDSGVVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGMT 458

  Fly   484 NVELAQPFKMASAY--GAPEYTHYTTLFAGCLDYVFYQNDRFEVLKVV-PLPTEEELKAN-TAIP 544
            |..:...||:.|||  |...||:||..|.|.:||:||...:...|.:: ||.....::.| :..|
Mouse   459 NGRITHGFKLKSAYENGLMPYTNYTFDFKGIIDYIFYSKPQLNTLAILGPLDHHWLVENNISGCP 523

  Fly   545 SAVFPSDHVALVADLK 560
            ..:.||||.:|.|.|:
Mouse   524 HPLIPSDHFSLFAQLE 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31759NP_723735.2 EEP 239..561 CDD:469791 104/374 (28%)
Cnot6NP_001277670.1 LRR <51..>133 CDD:443914 8/30 (27%)
LRR 1 52..73
leucine-rich repeat 53..75 CDD:275378
LRR 2 75..96
leucine-rich repeat 76..98 CDD:275378
LRR 3 98..120 4/11 (36%)
leucine-rich repeat 99..121 CDD:275378 4/12 (33%)
LRR 4 121..143 7/35 (20%)
leucine-rich repeat 122..133 CDD:275378 4/16 (25%)
Nuclease domain. /evidence=ECO:0000250 153..557 107/412 (26%)
Deadenylase_CCR4a 191..540 CDD:197340 104/374 (28%)
Blue background indicates that the domain is not in the aligned region.

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