DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31759 and cnot6l

DIOPT Version :9

Sequence 1:NP_723735.2 Gene:CG31759 / 326158 FlyBaseID:FBgn0051759 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001120421.1 Gene:cnot6l / 100145505 XenbaseID:XB-GENE-977551 Length:523 Species:Xenopus tropicalis


Alignment Length:450 Identity:114/450 - (25%)
Similarity:185/450 - (41%) Gaps:116/450 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 VTPEDIGYHLKFVVTPGNALGMTGPVVEKITNSAVQESPGR-------------CPFQDRQRHTT 228
            |.|.::|...:.     ..||:.|..:.:...|..||..|.             .|.|..||...
 Frog   111 VLPFELGRLFRL-----QTLGLKGNPLSQDILSLYQEPDGMRKLLNYMLDNLSVHPEQLPQRPWI 170

  Fly   229 NSLSESNEI------RVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNSD 287
             :|.|.::|      .|:.:|:|.|.||:..     |:.|||:..|..:|||...:.||:..::|
 Frog   171 -TLKERDQILPSVSFTVMCFNVLCDKYATRQ-----LYGYCPSWALNWEYRKKGIMEEIVSCDAD 229

  Fly   288 ILCLQEVDQR----IFDFDLKEILEQPPYNYHGIMAPKG----------KCAEGVAIFFRNSRFD 338
            |:.||||:..    :|...|||      ..|.|..:||.          |..:|.|||||..:|.
 Frog   230 IISLQEVETEQYYTLFMPALKE------RGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFS 288

  Fly   339 LLDSQILHLGSNIPALPVFESLWNKIKV-NAQLAERICERSTTLQ----TCLLRI---------- 388
            |:....:.              :|:|.: |::.:|.:..|..|..    |.||.:          
 Frog   289 LVQKHTVE--------------FNQIAMANSEGSEAMLNRVMTKDNIGVTVLLELHKDLSGAGMK 339

  Fly   389 ---KGTDNYVLVANTHLYFHPDADHIRLLQMGFSMLFVEQ---SISKAIK-------DFNISSHK 440
               ......::|||.|:::.|:...::|:|   :|:||.:   .|.||..       |.|     
 Frog   340 PHHSSEKQLLMVANAHMHWDPEYSDVKLIQ---TMMFVSELKSIIEKAASRPGSPTPDPN----- 396

  Fly   441 NIGLIFCGDFNSVPECGIYKLMT------------EQLAEKTLEDWQSNAEQAVSNVELAQPFKM 493
            :|..:.|.|.||:|:.|:.:.:|            |....:.|.::..|.:....:..:...|::
 Frog   397 SIPFVLCADLNSLPDSGVVEYLTNGGVADNHKDFKELRYNECLTNFSCNGKNGTPDGRITHGFQL 461

  Fly   494 ASAY--GAPEYTHYTTLFAGCLDYVFYQNDRFEVLKVV-PLPTEEELKAN-TAIPSAVFP 549
            .|||  ....||:||..|.|.:||:||.....:||.|: ||..:..::.| |..|....|
 Frog   462 RSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMDVLGVLGPLDPQWMVENNITGCPHPHLP 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31759NP_723735.2 EEP 239..561 CDD:294334 96/368 (26%)
cnot6lNP_001120421.1 leucine-rich repeat 33..52 CDD:275378
LRR_8 51..132 CDD:290566 6/25 (24%)
LRR_4 51..91 CDD:289563
leucine-rich repeat 53..75 CDD:275378
leucine-rich repeat 76..90 CDD:275378
Deadenylase_CCR4b 186..521 CDD:197339 96/367 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D724242at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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