DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31759 and cnot6l

DIOPT Version :10

Sequence 1:NP_723735.2 Gene:CG31759 / 326158 FlyBaseID:FBgn0051759 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001120421.1 Gene:cnot6l / 100145505 XenbaseID:XB-GENE-977551 Length:523 Species:Xenopus tropicalis


Alignment Length:450 Identity:114/450 - (25%)
Similarity:185/450 - (41%) Gaps:116/450 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 VTPEDIGYHLKFVVTPGNALGMTGPVVEKITNSAVQESPGR-------------CPFQDRQRHTT 228
            |.|.::|...:.     ..||:.|..:.:...|..||..|.             .|.|..||...
 Frog   111 VLPFELGRLFRL-----QTLGLKGNPLSQDILSLYQEPDGMRKLLNYMLDNLSVHPEQLPQRPWI 170

  Fly   229 NSLSESNEI------RVVSYNLLADLYASSDYAGSTLFSYCPAKYLQIDYRKPLFINEIIGYNSD 287
             :|.|.::|      .|:.:|:|.|.||:..     |:.|||:..|..:|||...:.||:..::|
 Frog   171 -TLKERDQILPSVSFTVMCFNVLCDKYATRQ-----LYGYCPSWALNWEYRKKGIMEEIVSCDAD 229

  Fly   288 ILCLQEVDQR----IFDFDLKEILEQPPYNYHGIMAPKG----------KCAEGVAIFFRNSRFD 338
            |:.||||:..    :|...|||      ..|.|..:||.          |..:|.|||||..:|.
 Frog   230 IISLQEVETEQYYTLFMPALKE------RGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFS 288

  Fly   339 LLDSQILHLGSNIPALPVFESLWNKIKV-NAQLAERICERSTTLQ----TCLLRI---------- 388
            |:....:.              :|:|.: |::.:|.:..|..|..    |.||.:          
 Frog   289 LVQKHTVE--------------FNQIAMANSEGSEAMLNRVMTKDNIGVTVLLELHKDLSGAGMK 339

  Fly   389 ---KGTDNYVLVANTHLYFHPDADHIRLLQMGFSMLFVEQ---SISKAIK-------DFNISSHK 440
               ......::|||.|:::.|:...::|:|   :|:||.:   .|.||..       |.|     
 Frog   340 PHHSSEKQLLMVANAHMHWDPEYSDVKLIQ---TMMFVSELKSIIEKAASRPGSPTPDPN----- 396

  Fly   441 NIGLIFCGDFNSVPECGIYKLMT------------EQLAEKTLEDWQSNAEQAVSNVELAQPFKM 493
            :|..:.|.|.||:|:.|:.:.:|            |....:.|.::..|.:....:..:...|::
 Frog   397 SIPFVLCADLNSLPDSGVVEYLTNGGVADNHKDFKELRYNECLTNFSCNGKNGTPDGRITHGFQL 461

  Fly   494 ASAY--GAPEYTHYTTLFAGCLDYVFYQNDRFEVLKVV-PLPTEEELKAN-TAIPSAVFP 549
            .|||  ....||:||..|.|.:||:||.....:||.|: ||..:..::.| |..|....|
 Frog   462 RSAYENNLMPYTNYTFDFKGVIDYIFYSKTHMDVLGVLGPLDPQWMVENNITGCPHPHLP 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31759NP_723735.2 EEP 239..561 CDD:469791 96/368 (26%)
cnot6lNP_001120421.1 LRR <33..>133 CDD:443914 6/26 (23%)
leucine-rich repeat 33..52 CDD:275378
leucine-rich repeat 53..75 CDD:275378
leucine-rich repeat 76..90 CDD:275378
Deadenylase_CCR4b 186..521 CDD:197339 96/367 (26%)
Blue background indicates that the domain is not in the aligned region.

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