DRSC/TRiP Functional Genomics Resources

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Protein Alignment AspRS-m and DPS1

DIOPT Version :9

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_013083.1 Gene:DPS1 / 850643 SGDID:S000003941 Length:557 Species:Saccharomyces cerevisiae


Alignment Length:718 Identity:160/718 - (22%)
Similarity:249/718 - (34%) Gaps:248/718 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 VEVSVTSVKVLNPDDPYDGPIKAKEKKQKFSIDDLEAEEAAAEASANLTSNNGESTEDSAEASTT 440
            ||.|....:|:..:|......||.:|.||......:.||.|.:..|     ..|:.|..|.|..|
Yeast    11 VEESAEPAQVILGEDGKPLSKKALKKLQKEQEKQRKKEERALQLEA-----EREAREKKAAAEDT 70

  Fly   441 A-------------NASLIAEQRAKVADTNK---------FADRTHNCGELTSNDINEKVVICGW 483
            |             ::....::|.|..|.::         |..|.||..:..:.           
Yeast    71 AKDNYGKLPLIQSRDSDRTGQKRVKFVDLDEAKDSDKEVLFRARVHNTRQQGAT----------- 124

  Fly   484 LEFQRMNKFFILRDAYGQTQVLLSPKTYG-----LEEYAETGVPIESIVRVEGTV----IPRPAA 539
                  ..|..||......|.|:.....|     :.::|.: :.:||||.|.|.|    .|..:|
Yeast   125 ------LAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGS-LNLESIVLVRGIVKKVDEPIKSA 182

  Fly   540 TINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAGER------------LRLTHRYLDLRF 592
            |:.      ::|:...|:..::...:.||..:...:|:...            .||.:|.:|||.
Yeast   183 TVQ------NLEIHITKIYTISETPEALPILLEDASRSEAEAEAAGLPVVNLDTRLDYRVIDLRT 241

  Fly   593 NDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLF-RRTPGGAQEFVVPTRKAGHFYSLVQSPQ 656
            ...|...|:::.|....||||.. ..|.||.||.|. ..:.||:..|.| |...|..| |.||||
Yeast   242 VTNQAIFRIQAGVCELFREYLAT-KKFTEVHTPKLLGAPSEGGSSVFEV-TYFKGKAY-LAQSPQ 303

  Fly   657 QFKQMLMSGGIDRYFQVARCYRDEATRPDR-QPEFTQLDIELSFTSR-DDIMQLIEETLRYSW-- 717
            ..||.|:....:|.:::...:|.|.:...| ..|||.||:|::|... .:::..:.|...:.:  
Yeast   304 FNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSE 368

  Fly   718 -PKDFP------RLQTPFR-----------RITYEEAMEKYGNDKPDTRFGFLLNNVSEIIEKSD 764
             ||.|.      |.|.|..           |:||:|.:|                          
Yeast   369 LPKRFAHEIELVRKQYPVEEFKLPKDGKMVRLTYKEGIE-------------------------- 407

  Fly   765 EFKEKYDDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGTLFVRKFGPTKDVQEKLGKLLGEDV 829
                          ::||:               |||         .|..:|:..:..|.||:  
Yeast   408 --------------MLRAA---------------GKE---------IGDFEDLSTENEKFLGK-- 432

  Fly   830 ATEVADKFDLEENDLLFLGIGSKVETRELLGRIRLDYQDFLVENAKIKKPNDFRFLWVID-FPLF 893
              .|.||:|                                         .||   :::| ||| 
Yeast   433 --LVRDKYD-----------------------------------------TDF---YILDKFPL- 450

  Fly   894 ERNRETNQLESVHHPFTLPHSDDLENFATSCENLESIRSQAYDLVLNGQEVGGGSIRIHDRDMQH 958
                                  ::..|.|..:......|.:||..:.|:|:..|:.||||    |
Yeast   451 ----------------------EIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHD----H 489

  Fly   959 FILEQILKI----PHD-HLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNG 1018
            .:|::.:|.    |.| .|.........|||||.|..:||:|::......::||....||     
Yeast   490 ALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFP----- 549

  Fly  1019 RDP 1021
            |||
Yeast   550 RDP 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 RPA_2b-aaRSs_OBF_like 148..303 CDD:415809
EcAspRS_like_N 291..410 CDD:239812 10/33 (30%)
aspS 462..1045 CDD:234775 136/610 (22%)
DPS1NP_013083.1 PLN02850 19..557 CDD:215456 157/710 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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