DRSC/TRiP Functional Genomics Resources

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Protein Alignment AspRS-m and dars2

DIOPT Version :9

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:XP_699804.3 Gene:dars2 / 571144 ZFINID:ZDB-GENE-070912-443 Length:660 Species:Danio rerio


Alignment Length:612 Identity:284/612 - (46%)
Similarity:387/612 - (63%) Gaps:48/612 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   457 NKFADRTHNCGELTSNDINEKVVICGWLEFQRMNKFFILRDAYGQTQVLLSPKTYGLEEYAET-- 519
            :.|:.|:|.||||.|:.|:::|.:|||:::.|.:.|.||||..|..|:|: |:.....|..::  
Zfish    66 SSFSQRSHTCGELCSSHIDKEVTLCGWVQYLRQDLFVILRDFSGLVQILI-PQDESKSELKKSLL 129

  Fly   520 GVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAGERLRLT 584
            .:.:||::.|:|.||.||....|..:.||.:||.|:.:.|||.::| |||||::|.:..|.||:.
Zfish   130 ALTVESVIMVKGRVIRRPEGQENKNISTGEIEVCAESIEVLNTSRK-LPFEIKEFVKKSEALRMQ 193

  Fly   585 HRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEFVVPTRKAGHFY 649
            :||||||...||:||||||.::|||||||.|..|||:|||||||:||||||:|||||:...|.||
Zfish   194 YRYLDLRSATMQNNLRLRSQMVMKMREYLCNLHGFVDVETPTLFKRTPGGAKEFVVPSGDPGKFY 258

  Fly   650 SLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSRDDIMQLIEETLR 714
            ||.||||||||:||..|||||||:|||||||.::|||||||||:|||:||..:..:|.|||..::
Zfish   259 SLPQSPQQFKQLLMVAGIDRYFQLARCYRDEGSKPDRQPEFTQVDIEMSFVDQAGVMSLIEGLVQ 323

  Fly   715 YSWPKDFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLNNVSEIIEKSDEFKEKYDDLGAYAIV 779
            :|||:|..::..||..:||||||..||.||||||||..|.:||...:            ||....
Zfish   324 FSWPEDKGQINVPFPTLTYEEAMRDYGVDKPDTRFGMKLVDVSTAFQ------------GAQIEF 376

  Fly   780 VRAS--------EAFWNGAARKHYESLGKEFKGTLFVRKFGPTKDVQE--------------KLG 822
            ::.:        :|.......||.:  ||:|:   |:::...|:..||              .|.
Zfish   377 IKDALLEPEGCVQAICVPEGTKHLK--GKDFE---FLKQAAKTQYGQEVSVVPVRADGSLKSPLS 436

  Fly   823 KLLGEDVATEVADKFDLEENDLLFLGIGSKVETRELLGRIRLDYQDFLVE-NAKIKKPNDFRFLW 886
            :||.:....::.........||:|:..|.:...|.|||::||...:.|.. ...::.|:.|.|||
Zfish   437 RLLSDTAKQQLLQMAQANAGDLIFITAGPRENVRPLLGKLRLQVAELLERYGVPVRDPSVFHFLW 501

  Fly   887 VIDFPLF-ERNRETNQLESVHHPFTLPHSDDLENFATSCENLESIRSQAYDLVLNGQEVGGGSIR 950
            |:||||| .:..:..:|||.|||||.|..:|.....|   ....:|.|.|||||||.|:||||||
Zfish   502 VVDFPLFLPKEDDPERLESAHHPFTAPVPEDAHLLYT---RPHMVRGQHYDLVLNGCEIGGGSIR 563

  Fly   951 IHDRDMQHFILEQILKIPHDHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPKS 1015
            ||:...|.:||:.|||.....|||||.||:||.|||||||||||||::|:..|.|||||||||||
Zfish   564 IHNASQQLYILDTILKEDPSLLSHLLEALDSGAPPHGGIALGLDRLVSIIVGAPSIRDVIAFPKS 628

  Fly  1016 LNGRDPLSNAPVPISDEEMRLYHLSVV 1042
            ..|.|.:|.||..:|:::::.||:|||
Zfish   629 FRGHDLMSQAPDFVSEKDLKPYHISVV 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 RPA_2b-aaRSs_OBF_like 148..303 CDD:415809
EcAspRS_like_N 291..410 CDD:239812
aspS 462..1045 CDD:234775 283/607 (47%)
dars2XP_699804.3 aspS 71..657 CDD:234775 283/607 (47%)
EcAspRS_like_N 71..204 CDD:239812 56/134 (42%)
AspRS_core 208..630 CDD:238400 213/441 (48%)
GAD 377..469 CDD:281005 17/96 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596864
Domainoid 1 1.000 401 1.000 Domainoid score I696
eggNOG 1 0.900 - - E1_COG0173
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7093
Inparanoid 1 1.050 515 1.000 Inparanoid score I1261
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D697974at2759
OrthoFinder 1 1.000 - - FOG0003334
OrthoInspector 1 1.000 - - oto39913
orthoMCL 1 0.900 - - OOG6_101912
Panther 1 1.100 - - LDO PTHR22594
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1433
SonicParanoid 1 1.000 - - X2226
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.790

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