DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AspRS-m and nars2

DIOPT Version :9

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:XP_021337111.1 Gene:nars2 / 561673 ZFINID:ZDB-GENE-060929-596 Length:505 Species:Danio rerio


Alignment Length:644 Identity:124/644 - (19%)
Similarity:216/644 - (33%) Gaps:250/644 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 TNKFADRTHNCGELTS-----------NDINEKVVICGWLEF---QRMNKFFILRD--AYGQTQV 504
            ::||.||.  |..:.|           .:....|.|.||:..   |:.|.|..|.|  :....||
Zfish    20 SSKFLDRL--CSRMISKKMRVSDALACKETGSDVRIQGWVRSVRPQKDNLFLHLNDGSSLQPLQV 82

  Fly   505 LLSPK------TYGLEEYAETGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPA 563
            :.|.:      |:|            ..|.:.||:...|....|.::|...::|..:    .|| 
Zfish    83 VASSQLNTRDLTFG------------CAVDITGTLEKSPNKRQNVELQAQSIKVVGE----CNP- 130

  Fly   564 KKNLPFEIRKFNRAGERLRLTH----RYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVET 624
             .:.||:|:      ||..|.:    .:|..|.|.....||:||.....::.:..:: |:|::.|
Zfish   131 -MDFPFKIK------ERHPLEYIRQFPHLRCRTNAFSSMLRIRSEATAAIQSFFRDH-GYVQIHT 187

  Fly   625 PTLFRRTPGGAQEF--VVPT--RKAG---HFYSL---VQSPQQFKQMLMSG-------------- 665
            |.:......||.|.  |.||  :|..   ||:|:   :....|....:|:|              
Zfish   188 PVITSNDCEGAGELFQVEPTGDKKDSDDPHFFSVPAYLTVSGQLHLEVMAGMFYWNLIPHGERKD 252

  Fly   666 ------GIDRYFQVARCYRDEATRPDRQ-PEFTQLDIELSFT-SRDDIMQLIEETLRYSWPKDF- 721
                  .....:.....:|.|.::..|. .||..::.|::|| |.||:|:::|:..:.:....| 
Zfish   253 MHDPLSAFSAVYTFGPTFRAENSQSRRHLAEFYMVEAEIAFTESLDDLMKVMEDLFKAATEHVFS 317

  Fly   722 ----------------------PRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLNNVSEIIEKSD 764
                                  |.|...|..|:|.||::             :|.:.|:....|.
Zfish   318 NCTEDVELFHKHVAPGHREQVDPMLNRKFNVISYTEAID-------------ILKSSSQNFTFSP 369

  Fly   765 EFKEKYDDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGTLFVRKFGPTKDVQEKLGKLLGEDV 829
            |                     |                                      |.|:
Zfish   370 E---------------------W--------------------------------------GCDL 375

  Fly   830 ATEVADKFDLEENDLLFLGIGSKVETRELLGRIRLDYQDFLVENAKIKKPNDFRFLWVIDFPLFE 894
            .||                                 ::.|||::..             :.|:| 
Zfish   376 QTE---------------------------------HEKFLVKHCG-------------NTPVF- 393

  Fly   895 RNRETNQLESVHHPFTLPHSDDLENFATSCENLESIR--SQAYDLVLNG-QEVGGGSIRIHDRDM 956
                     .|::|:      :|:.|... :|.:..|  :.|.||::.| .|:.|||:|   .:.
Zfish   394 ---------VVNYPY------ELKPFYAR-DNQDHPRHTAAAVDLLVPGVGELCGGSLR---EER 439

  Fly   957 QHFILEQILKIP-HDHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAFPK 1014
            .|.:.:::.:.. .|..:..|...|.|..||||..:|.:|.:..:....:|:|.|.|.:
Zfish   440 LHLLTQRLSQAGLEDTYAWYLQLREFGSVPHGGFGMGFERYLQCILGLNNIKDAIPFAR 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 RPA_2b-aaRSs_OBF_like 148..303 CDD:415809
EcAspRS_like_N 291..410 CDD:239812
aspS 462..1045 CDD:234775 121/638 (19%)
nars2XP_021337111.1 asnC 34..502 CDD:235176 118/628 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.