DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AspRS-m and AsnRS-m

DIOPT Version :9

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_611176.1 Gene:AsnRS-m / 36909 FlyBaseID:FBgn0034177 Length:460 Species:Drosophila melanogaster


Alignment Length:607 Identity:117/607 - (19%)
Similarity:207/607 - (34%) Gaps:232/607 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 LTSNDINEKVVICGWLEFQRM---NKFFILRDAYGQT----QVLLSPKTYGLEEYAETGVPIESI 526
            |.:|...:.:.|.||::..|.   |.|..:.|  |.|    ||:: |:|...:..|.     .|:
  Fly    18 LKTNKPGDSLAIQGWIKNVRRLKNNTFLDIND--GSTSSRFQVVV-PRTPENQHLAP-----GSV 74

  Fly   527 VRVEGTVIPRPAATINPKMQTGHVEVEADKVVVL-----------NPAKKNLPFEIRKFNRAGER 580
            :...|.:...|         .|..|:.|::|.:|           :|.:|:.|..:|:       
  Fly    75 IAAVGKIQVAP---------NGSFELHANQVEMLAEGRLQEGYPFSPKQKHPPEYVRE------- 123

  Fly   581 LRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTL-----------FRRTPGG 634
                |.:|..|.:.:...:|:|......:.:|:.:. .||::.||.|           ||..| .
  Fly   124 ----HLHLRSRVDFVAAQMRVRHKAQKAIHDYMDDQ-DFVQINTPLLTTNDCEGAGEVFRVQP-D 182

  Fly   635 AQEFV-------VPTRKAGHFYSLV--QSPQQFKQMLMSGGIDRYFQVARCYRDEATR-PDRQPE 689
            :|:.:       :|..:: :|.|.|  ....|.....|:.|:.:.:.::..:|.|.:: |....|
  Fly   183 SQDLLKQMNRPNIPMEQS-YFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENSKSPLHLAE 246

  Fly   690 FTQLDIELS-FTSRDDIMQLIEETLR--------------------YSWPKDFPRLQTPFRRITY 733
            |...:.||: ....:.:.|.||:.|:                    .:...|.|.||.|::.::|
  Fly   247 FYMFEAELAHLEEMEKLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNSNSDLPWLQVPWKIMSY 311

  Fly   734 EEAMEKYGNDKPDTRFGFLLNNVSEIIEKSDEFKEKYDDLGAYAIVVRASEAFWNGAARKHYESL 798
            :||::....:|...:....||.                                           
  Fly   312 DEALQVLQENKDSLKTPISLNE------------------------------------------- 333

  Fly   799 GKEFKGTLFVRKFGPTKDVQEKLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRELLGRIR 863
                         |.:||                                       :||     
  Fly   334 -------------GFSKD---------------------------------------QEL----- 341

  Fly   864 LDYQDFLVENAKIKKPNDFRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENLE 928
                 |||  |....|     ::|:|:|..::            ||.:..|....|         
  Fly   342 -----FLV--AHCGAP-----VFVVDWPAQQK------------PFYMKVSRSNPN--------- 373

  Fly   929 SIRSQAYDLVLNG-QEVGGGSIRIHDRDMQHFILEQILKIPHDHLSHLLSALESGCPPHGGIALG 992
              |..|.||::.. .|:.|||:|..|    ..||:....:|.| |...:...:.|..|.||..:|
  Fly   374 --RVHALDLLMPAVGELCGGSLRESD----PAILKSHPHLPKD-LEWYVDLRKYGGVPTGGFGMG 431

  Fly   993 LDRLIAILCRARSIRDVIAFPK 1014
            .:|.:.::...::|||||.||:
  Fly   432 FERYLQLVTGVKNIRDVIPFPR 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 RPA_2b-aaRSs_OBF_like 148..303 CDD:415809
EcAspRS_like_N 291..410 CDD:239812
aspS 462..1045 CDD:234775 117/607 (19%)
AsnRS-mNP_611176.1 asnC 13..460 CDD:235176 117/607 (19%)
EcAsnRS_like_N 27..101 CDD:239813 22/90 (24%)
AsxRS_core 115..456 CDD:238399 92/493 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473212
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22594
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.