DRSC/TRiP Functional Genomics Resources

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Protein Alignment AspRS-m and AspRS

DIOPT Version :9

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_001260930.1 Gene:AspRS / 36420 FlyBaseID:FBgn0002069 Length:531 Species:Drosophila melanogaster


Alignment Length:666 Identity:156/666 - (23%)
Similarity:263/666 - (39%) Gaps:176/666 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 DGPIKAKEKKQKFSIDDLEAEEAAAEASANLTSN-NGESTEDSAEASTTANASLIAEQRAKVADT 456
            :|...:|:..:|.:....:||:.|..||....:| .|:|.||  .|:.....|.:.:.:.|.::.
  Fly    10 NGEQVSKKGAKKLAKAAKKAEQKAENASTAAANNAGGDSAED--HAAGRYGLSEMIQSKDKRSER 72

  Fly   457 NKFADRTHNCGELTSNDINEKVVICGWLEFQRMNK---FFILRDAYGQTQVLLSPKTYGLEEYAE 518
            | |...:...|::...    .|.:.|.:...|...   |.|||......|.:|:......::..:
  Fly    73 N-FVPVSELSGQVGKG----LVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGDVISKQMVK 132

  Fly   519 --TGVPIESIVRVEGTVIPRPAATINPKMQT---GHVEVEADKVVVLNPAKKNLPFEIRKFN--- 575
              ..:|.|||:.::.    :|.| ::.|:::   ..:|:..:::.|::.||..||.:|...:   
  Fly   133 FAGNIPKESIIDIQA----KPVA-VSSKIESCTEQSLELSVEQIFVISQAKAQLPLQIEDASRPE 192

  Fly   576 ----------RAGERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLF-R 629
                      |..:..||.:|.||||....|...||.:.|....|:.|... ||.|:.||.:. .
  Fly   193 NADDAEGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQ-GFTEIHTPKIISA 256

  Fly   630 RTPGGAQEFVVPTRKAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQ-PEFTQL 693
            .:.|||..|.|...|...:  |.||||.:|||.::...|:.:.|...:|.|.:...|. .||..|
  Fly   257 ASEGGANVFTVSYFKDSAY--LAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGL 319

  Fly   694 DIELSFTSRDDIMQLIEETLRYSWPKDFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLNNVSE 758
            |:|::|                              :..|.|.:...||     .|..:...:  
  Fly   320 DLEMAF------------------------------KYHYHEVLHTIGN-----TFTSIFKGL-- 347

  Fly   759 IIEKSDEFKEKYDDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGTLFVRKF-GPTKDVQEKLG 822
                    ::||                     .|..||:|:::|...|  || .|...:|...|
  Fly   348 --------RDKY---------------------AKEIESVGQQYKVDAF--KFLEPPLILQFADG 381

  Fly   823 KLLGEDVATEVADKFDLEENDLLFLGIGSKVETRELLGRIRLDYQDFLVENAKIKKPNDFRFLWV 887
            ..:..:...|..|:.||            .....:||||:           .|.|...||   ::
  Fly   382 VAMLREAGVETGDEEDL------------STPNEKLLGRL-----------VKAKYDTDF---YI 420

  Fly   888 ID-FPLFERNRETNQLESVHHPF-TLPHSDDLENFATSCENLESIRSQAYDLVLNGQEVGGGSIR 950
            :| |||..|            || |:|..::            .:.|.:||:.:.|:|:..|:.|
  Fly   421 LDKFPLAIR------------PFYTMPDPNN------------PVYSNSYDMFMRGEEILSGAQR 461

  Fly   951 IHDRDMQHFILEQILKIPHDHL--SHLLSALES---GCPPHGGIALGLDRLIAILCRARSIRDVI 1010
            |||.:   :::|   :..|..:  |.:.:.:||   |||||.|..:|::|::.:.....:||...
  Fly   462 IHDPE---YLIE---RAKHHGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTS 520

  Fly  1011 AFPKSLNGRDPLSNAP 1026
            .||     |||....|
  Fly   521 MFP-----RDPKRLTP 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 RPA_2b-aaRSs_OBF_like 148..303 CDD:415809
EcAspRS_like_N 291..410 CDD:239812 3/16 (19%)
aspS 462..1045 CDD:234775 138/596 (23%)
AspRSNP_001260930.1 PLN02850 49..531 CDD:215456 144/625 (23%)
AspRS_cyto_N 89..187 CDD:239815 23/102 (23%)
AsxRS_core 203..527 CDD:238399 112/455 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473205
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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