DRSC/TRiP Functional Genomics Resources

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Protein Alignment AspRS-m and dars-2

DIOPT Version :10

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_506019.2 Gene:dars-2 / 3565124 WormBaseID:WBGene00001095 Length:593 Species:Caenorhabditis elegans


Alignment Length:612 Identity:250/612 - (40%)
Similarity:371/612 - (60%) Gaps:58/612 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 KVADTNKFADRTHNCGELTSNDINEKVVICGWLEFQRMNKFFILRDAYGQTQVLLSPKTYGLEEY 516
            ::..|:.:..|||.|.||::::.||||.:.|||..:||::||:||||||..|..:|..: .|:..
 Worm    14 RILSTSSYTVRTHICDELSTSNKNEKVSVMGWLSHKRMDRFFVLRDAYGSVQAKISASS-KLQSL 77

  Fly   517 AETGVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRKFNRAGERL 581
            .: .:|.||:|||:|.|:.| ....|.||:||.:|::.:::.|||.|..|:|. :...| |.||.
 Worm    78 LK-DIPYESVVRVDGIVVDR-GDNRNSKMKTGDIEIDVEELTVLNKATSNIPM-LPDAN-ANERT 138

  Fly   582 RLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEFVV--PTRK 644
            ||.:||:|||.:.:|.:|||||..:..:|.:|:...|||:||||||||||||||.||||  |:..
 Worm   139 RLKYRYIDLRSDKLQKSLRLRSEFVHNVRRFLVEKSGFVDVETPTLFRRTPGGAAEFVVPAPSPN 203

  Fly   645 AGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSRDDIMQLI 709
            .|..|||.||||||||:||.|.||||||:|||||||.::.||||||||:|:|:|||:::.:||||
 Worm   204 QGLAYSLPQSPQQFKQLLMVGAIDRYFQIARCYRDEGSKGDRQPEFTQVDVEMSFTTQNGVMQLI 268

  Fly   710 EETLRYSWPKDFPRL--QTPFRRITYEEAMEKYGNDKPDTRFGFLL----NNVSEIIEKSDEFKE 768
            |:.:..:||:....:  ::||.||.|.:||..||.||||.|..:.:    |::.|.::|..:   
 Worm   269 EDMIISAWPESLNHIKPKSPFPRIPYSDAMRLYGIDKPDMRIPWQIDDVDNDIFEFLQKDID--- 330

  Fly   769 KYDDLGAYAIVVRASEAFWNGAARKHY-ESLGKEFKGTLFVRKFGPTKDV----QEKLGKLLGED 828
              ||.....|:|      ..||.:... .|:..|:|..:.:.:.|....:    |::..|.....
 Worm   331 --DDTWRSRILV------CRGAGKTTISNSMKNEWKRLIQMNENGKNFAICHPSQKRWFKPFDNQ 387

  Fly   829 VATEVADKFDLEENDLLFLGIGSK---VETRELLGRIRLDYQDFLVENAKIKKPNDFRFLWVIDF 890
               ::.|:|.|.:.|:|.:..|:.   ..|.|:.|               ::..::....|::||
 Worm   388 ---KLIDQFGLIDEDVLIVCWGNSEGVYWTLEVCG---------------LRSKSNVTAHWIVDF 434

  Fly   891 PLFERNRETNQLESVHHPFTLPHSDDLE-NFATSCENLESIRSQAYDLVLNGQEVGGGSIRIHDR 954
            |||  :.|..||.|.|||||.|...|:: .::...:.|..|..|.||||:||.|:|||||||.:.
 Worm   435 PLF--SFEEGQLVSTHHPFTAPLEKDIDILYSNDIDKLLQITGQHYDLVINGVEMGGGSIRIENS 497

  Fly   955 DMQHFILEQILKIPHDHLSHLLSALESGCPPHGGIALGLDRLIAILCR----ARSIRDVIAFPKS 1015
            ::|..:| ::|..|.|.:.|||:||..|.|||||.||||||.:|:|..    ...:||||||||:
 Worm   498 EIQRHVL-KVLGEPTDEMEHLLNALSHGAPPHGGFALGLDRFVAMLTSDGNPLTPVRDVIAFPKT 561

  Fly  1016 LNGRDPLSNAPVPISDEEMRLYHLSVV 1042
            .||:|.:|:||..:|.:::..|.:|::
 Worm   562 KNGKDLMSDAPATLSQKQLERYGISLL 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold. 148..303 CDD:471953
EcAspRS_like_N 291..410 CDD:239812
aspS 462..1045 CDD:234775 249/602 (41%)
dars-2NP_506019.2 AspS 24..593 CDD:439943 249/602 (41%)
Blue background indicates that the domain is not in the aligned region.

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