DRSC/TRiP Functional Genomics Resources

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Protein Alignment AspRS-m and AsnRS

DIOPT Version :10

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_609948.1 Gene:AsnRS / 35194 FlyBaseID:FBgn0086443 Length:558 Species:Drosophila melanogaster


Alignment Length:729 Identity:160/729 - (21%)
Similarity:268/729 - (36%) Gaps:245/729 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 DQSLSDTFLSTPEQTVIQIVGKVLGRPKANVNLKYDTGEVEVSVTSVKVLNPDDPYDGPIKAKEK 401
            |:| .|...|.|.:|::|.:......|...:.:  ||          |..|..:||:...|::.|
  Fly    23 DES-GDGSESKPFKTILQAMRHAGKEPFPTIYV--DT----------KDPNAAEPYEPAAKSQLK 74

  Fly   402 K-QKFSI-------DDLEAEEAAAEASANLTSNNGESTEDSAEASTTANASLIAEQRAKVADTNK 458
            | ||..:       |.|:.|...||       ...::.||:.:...:.:.||...::.::.    
  Fly    75 KIQKLFVRESHKNADKLQREAEDAE-------KRQQNLEDARKVKISEDPSLPVARKIRIY---- 128

  Fly   459 FADRTHNCGELTSNDINEKVVICGWL-EFQRMNK---FFILRDAYGQTQVLLSPKTYGLEEYAET 519
                     |.|:|. :.:|.:.||: ..:|..|   |..|||..|..|.:|:.:.  .:.|...
  Fly   129 ---------EGTANR-DSRVKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVLNDQL--CQTYDAL 181

  Fly   520 GVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEAD--KVVVLNP-----AKKNLPFEIRKFNRA 577
            .:..||.|.:.||:...|.....|   .|| |:..|  :::.|.|     |..|        ..|
  Fly   182 TLSTESSVVLFGTLKLVPEGKTAP---GGH-ELNVDYWELIGLAPPGGADAILN--------EEA 234

  Fly   578 GERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFR-RTPGGAQEFVVP 641
            ...::|.:|::.:|..:....|::||.|....|.: ....|:.||..|||.: :..||:..|.: 
  Fly   235 QPDVQLDNRHIMIRGENTSKVLKMRSVVTQAFRGH-YEARGYNEVTPPTLVQTQVEGGSTLFKL- 297

  Fly   642 TRKAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQ-PEFTQLDIELSFTSRDDI 705
             :..|....|.||.|.:.:..:. .:...|.:::.||.|.:|..|. .|:|.::.|..|.:.||:
  Fly   298 -KYFGEEAYLTQSSQLYLETCLP-ALGDVFTISQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDL 360

  Fly   706 MQLIEE--------TLRYSW-------PKDFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLNN 755
            :..:|:        .|:..|       ..||...|.||||:.||:|: |:..:          ||
  Fly   361 LDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYEDAI-KWLKE----------NN 414

  Fly   756 VSEIIEKSDEFKEKYDDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGTLFVRKFGPTKDVQE- 819
            |::            ||                               ||.:  :||  :|:.| 
  Fly   415 VTK------------DD-------------------------------GTFY--EFG--EDIPEA 432

  Fly   820 ---KLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRELLGRIRLDYQDFLVENAKIKKPND 881
               |:...:.|.:                            :|.|...:.:.|.::..|      
  Fly   433 PERKMTDTINEPI----------------------------MLCRFPAEIKSFYMQRCK------ 463

  Fly   882 FRFLWVIDFPLFERNRETNQLESVHHPFTLPHSDDLENFATSCENLESIRSQAYDLVL-NGQEVG 945
                        |..|.|   |||                              |::| |..|:.
  Fly   464 ------------EDQRLT---ESV------------------------------DVLLPNVGEIV 483

  Fly   946 GGSIRIHDRDMQHFILEQILK-------IPHDHLSHLLSALESGCPPHGGIALGLDRLIAILCRA 1003
            |||:||:|.       |::||       .|..:..:....: .|..||||..|||:|.:..|...
  Fly   484 GGSMRIYDS-------EELLKGYKREGIDPQPYYWYTDQRV-YGTMPHGGYGLGLERFLCWLLNR 540

  Fly  1004 RSIRDVIAFPKSLN 1017
            ..||:|..:|:.|:
  Fly   541 YHIREVCLYPRFLD 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold. 148..303 CDD:471953
EcAspRS_like_N 291..410 CDD:239812 20/80 (25%)
aspS 462..1045 CDD:234775 132/596 (22%)
AsnRSNP_609948.1 AsnS 135..558 CDD:439788 129/583 (22%)
Blue background indicates that the domain is not in the aligned region.

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