DRSC/TRiP Functional Genomics Resources

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Protein Alignment AspRS-m and Dars2

DIOPT Version :9

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_001029315.1 Gene:Dars2 / 304919 RGDID:1308286 Length:652 Species:Rattus norvegicus


Alignment Length:629 Identity:300/629 - (47%)
Similarity:396/629 - (62%) Gaps:37/629 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   446 IAEQRAKVADTNKFADRTHNCGELTSNDINEKVVICGWLEFQRMNKFFILRDAYGQTQVLLSPKT 510
            ::.||  |.:.:.|..||:.||||.|:.:.::|.:|||::::|.|.|.:|||.:|..|:|: |:.
  Rat    35 LSSQR--VPEFSSFVARTNTCGELRSSHLGQEVTLCGWIQYRRQNTFLVLRDCHGLVQILI-PQD 96

  Fly   511 YGLEEYAET--GVPIESIVRVEGTVIPRPAATINPKMQTGHVEVEADKVVVLNPAKKNLPFEIRK 573
            ........|  ..|:||:|||.||||.||....||||.||.:|::|....:||..|| |||||:.
  Rat    97 ESAASVRRTLCEAPVESVVRVSGTVIARPLGQENPKMPTGEIEIKAKTAELLNACKK-LPFEIKD 160

  Fly   574 FNRAGERLRLTHRYLDLRFNDMQHNLRLRSAVIMKMREYLINYLGFVEVETPTLFRRTPGGAQEF 638
            |.:..|.|||.:||||||.:.|||||||||.::|||||||....|||::||||||:||||||:||
  Rat   161 FVKKTEALRLQYRYLDLRSSQMQHNLRLRSQMVMKMREYLCTLHGFVDIETPTLFKRTPGGAKEF 225

  Fly   639 VVPTRKAGHFYSLVQSPQQFKQMLMSGGIDRYFQVARCYRDEATRPDRQPEFTQLDIELSFTSRD 703
            :||:|:.|.||||.||||||||:||.||:|||||||||||||.:||||||||||:|||:||..:.
  Rat   226 LVPSREPGRFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIEMSFVDQT 290

  Fly   704 DIMQLIEETLRYSWPKDFPRLQTPFRRITYEEAMEKYGNDKPDTRFGFLLNNVSEIIEKSDEFKE 768
            .|..|:|..|.||||:|...|..||..:|:.||:..||.||||||||..:.::|::. ::.|.:.
  Rat   291 GIQHLVEGLLHYSWPEDKDPLVAPFPSMTFAEALATYGTDKPDTRFGMKIVDISDVF-RNTEIRF 354

  Fly   769 KYDDLGAYAIVVRASEAFWNGAARKHYESLGKEFKGTLFVRKFGPTKDVQEKL------------ 821
            ..|.|......|:|. ....||.....|.:.       |:|||......||.|            
  Rat   355 LQDALAKPQGTVKAI-CVHEGAKYLRKEDIE-------FIRKFAAHHFSQEVLPIFLNARKNWSS 411

  Fly   822 --GKLLGEDVATEVADKFDLEENDLLFLGIGSKVETRELLGRIRLDYQDFL-VENAKIKKPNDFR 883
              .|.:.|:...|:....:::|:|::.|..|...:...|||::||:..|.| .....::.|..|.
  Rat   412 PFAKFITEEERLELTRLMEIQEDDMVLLTAGQHEKACSLLGKLRLECADLLETRGLALRDPALFS 476

  Fly   884 FLWVIDFPLFERNRET-NQLESVHHPFTLPHSDDLENFATSCENLESIRSQAYDLVLNGQEVGGG 947
            ||||:|||||....|: .:|||.|||||.||..|:....|   ..|.:|.|.|||||||.|:|||
  Rat   477 FLWVLDFPLFLAKEESPTELESAHHPFTAPHPGDIHLLYT---EPEKVRGQHYDLVLNGNEIGGG 538

  Fly   948 SIRIHDRDMQHFILEQILKIPHDHLSHLLSALESGCPPHGGIALGLDRLIAILCRARSIRDVIAF 1012
            ||||||..:|.:|||.:||.....|||||.||:.|.|||||||||||||:.::..|.||||||||
  Rat   539 SIRIHDAQLQRYILETLLKEDVKLLSHLLQALDYGAPPHGGIALGLDRLVCLVTGAPSIRDVIAF 603

  Fly  1013 PKSLNGRDPLSNAPVPISDEEMRLYHLSV---VDEEEPSTNNTS 1053
            |||..|.|.:||||..:|.|:::.||:.|   .|.||.::...|
  Rat   604 PKSYRGHDLMSNAPDTVSPEDLKPYHIHVSWPTDSEERASATPS 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 RPA_2b-aaRSs_OBF_like 148..303 CDD:415809
EcAspRS_like_N 291..410 CDD:239812
aspS 462..1045 CDD:234775 293/603 (49%)
Dars2NP_001029315.1 aspS 49..635 CDD:234775 292/599 (49%)
EcAspRS_like_N 49..182 CDD:239812 62/134 (46%)
AspRS_core 186..606 CDD:238400 213/431 (49%)
Aspartate. /evidence=ECO:0000250 243..246 2/2 (100%)
GAD 360..451 CDD:281005 19/98 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354545
Domainoid 1 1.000 418 1.000 Domainoid score I630
eggNOG 1 0.900 - - E1_COG0173
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7093
Inparanoid 1 1.050 547 1.000 Inparanoid score I1108
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D697974at2759
OrthoFinder 1 1.000 - - FOG0003334
OrthoInspector 1 1.000 - - oto96381
orthoMCL 1 0.900 - - OOG6_101912
Panther 1 1.100 - - LDO PTHR22594
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2226
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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