DRSC/TRiP Functional Genomics Resources

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Protein Alignment AspRS-m and dars-1

DIOPT Version :9

Sequence 1:NP_001260520.2 Gene:AspRS-m / 326155 FlyBaseID:FBgn0051739 Length:1139 Species:Drosophila melanogaster
Sequence 2:NP_499089.1 Gene:dars-1 / 176334 WormBaseID:WBGene00001094 Length:531 Species:Caenorhabditis elegans


Alignment Length:696 Identity:166/696 - (23%)
Similarity:263/696 - (37%) Gaps:208/696 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 DTGEVEVSVTSVKVLNPDDPYDGPIKAKEKKQKFSIDDLEAEEAAAEASANLTSNNGESTEDSAE 436
            |..|.|....|.|.||         |...|.:|        :|.|.|...|.........|| |.
 Worm     3 DAAEGEQPKLSKKELN---------KLARKAKK--------DEKAGEKGGNQQQAAAMDQED-AS 49

  Fly   437 ASTTANASLIAEQRAKVADTNKFADRTHNCGELTSNDINEKVVICGWLEFQR---MNKFFILRDA 498
            .....:..|:..:..||.:..|..       |:..::..:.|.:.|.:...|   .|.|.:||..
 Worm    50 KDFYGSYGLVNSKEKKVLNFLKVK-------EINVSNATKDVWVRGRIHTTRSKGKNCFLVLRQG 107

  Fly   499 YGQTQVLLSPKTYGLEEYAE------TGVPIESIVRVEGTV--IPRPAATINPKMQTGHVEVEAD 555
            ....||.:    :..|:.::      :.:..||||.|..|:  :..|..:...|    .||:.|.
 Worm   108 VYTVQVAM----FMNEKISKQMLKFVSSISKESIVDVYATINKVDNPIESCTQK----DVELLAQ 164

  Fly   556 KVVVLNPAKKNLPFEIRKFNR--------AGER----------LRLTHRYLDLRFNDMQHNLRLR 602
            :|.|::.:...||.:|...:|        |.|:          .||.:|.:|||........|::
 Worm   165 QVFVVSTSAPKLPLQIEDASRRAPTDEEKASEQENQLAVVNLDTRLDNRVIDLRTPTSHAIFRIQ 229

  Fly   603 SAVIMKMREYLINYLGFVEVETPTLFRR-TPGGAQEFVVPTRKAGHFYSLVQSPQQFKQMLMSGG 666
            :.:..:.|. :::..||||:..|.:... :.|||..|.|...|...:  |.||||.:|||.::|.
 Worm   230 AGICNQFRN-ILDVRGFVEIMAPKIISAPSEGGANVFEVSYFKGSAY--LAQSPQLYKQMAIAGD 291

  Fly   667 IDRYFQVARCYRDEATRPDR-QPEFTQLDIELSFTSR-DDIMQLIEETLRYSWPKDFPRLQTPFR 729
            .::.:.:...:|.|.:...| ..||..||:|::|... .::|:.|.|.|    .:.|..||.   
 Worm   292 FEKVYTIGPVFRAEDSNTHRHMTEFVGLDLEMAFNFHYHEVMETIAEVL----TQMFKGLQQ--- 349

  Fly   730 RITYEEAMEKYGNDKPDTRFGF-----LLNNVSEIIEKSDEFKEKYDDLGAYAIVVRASEAFWNG 789
              .|::.:...||..|...|.|     :|               ||.|    ||.:         
 Worm   350 --NYQDEIAAVGNQYPAEPFQFCEPPLIL---------------KYPD----AITL--------- 384

  Fly   790 AARKHYESLGKEFKGTLFVRKFGPTKDVQEKLGKLLGEDVATEVADKFDLEENDLLFLGIGSKVE 854
             .|::...:|.|                         :|::|.| :||                 
 Worm   385 -LRENGIEIGDE-------------------------DDLSTPV-EKF----------------- 405

  Fly   855 TRELLGRIRLDYQDFLVENAKIKKPNDFRFLWVID-FPLFERNRETNQLESVHHPFTLPHSDDLE 918
                ||::           .|.|...||   :|:| |||           ||...:|:|.:.| |
 Worm   406 ----LGKL-----------VKEKYSTDF---YVLDKFPL-----------SVRPFYTMPDAHD-E 440

  Fly   919 NFATSCENLESIRSQAYDLVLNGQEVGGGSIRIHDRDMQHFILEQILKIPHDHLSHLLSALES-- 981
            .:           |.:||:.:.|:|:..|:.||||.||    |.:..|.....|:.:.|.::|  
 Worm   441 RY-----------SNSYDMFMRGEEILSGAQRIHDADM----LVERAKHHQVDLAKIQSYIDSFK 490

  Fly   982 -GCPPHGGIALGLDRLIAILCRARSIRDVIAFPKSLNGRDPLSNAP 1026
             |||||.|..:||:|:..:.....:||....||     |||....|
 Worm   491 YGCPPHAGGGIGLERVTMLFLGLHNIRLASLFP-----RDPKRLTP 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRS-mNP_001260520.2 RPA_2b-aaRSs_OBF_like 148..303 CDD:415809
EcAspRS_like_N 291..410 CDD:239812 10/37 (27%)
aspS 462..1045 CDD:234775 145/606 (24%)
dars-1NP_499089.1 PLN02850 4..531 CDD:215456 164/693 (24%)
AspRS_cyto_N 84..182 CDD:239815 26/105 (25%)
AsxRS_core 204..527 CDD:238399 113/456 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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