DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31689 and ABCG24

DIOPT Version :9

Sequence 1:NP_001259954.1 Gene:CG31689 / 326154 FlyBaseID:FBgn0031449 Length:624 Species:Drosophila melanogaster
Sequence 2:NP_175745.4 Gene:ABCG24 / 841775 AraportID:AT1G53390 Length:1109 Species:Arabidopsis thaliana


Alignment Length:625 Identity:166/625 - (26%)
Similarity:270/625 - (43%) Gaps:110/625 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEKLTQEFALRTMPDFATSSP------FNIIFEDLYYRVEVGKDREKKSVLKGIKGTFKSGELTA 59
            ||:..:......:...||:|.      ..:.|:||...::    ...|.||:.:.|:.|.|.:||
plant   478 MEQENKNLTFSGIVKMATNSETRKRHLMELSFKDLTLTLK----SNGKQVLRCVTGSMKPGRITA 538

  Fly    60 IMGPSGAGKSSLMNIL----TGLTKSG---VSGKIE-IGKARKLCGYIMQDDHFFPYFTVEETML 116
            :||||||||:||::.|    .|...||   ::||.| |...:|:.|::.|||......||||.:.
plant   539 VMGPSGAGKTSLLSALAGKAVGCKLSGLILINGKQESIHSYKKIIGFVPQDDVVHGNLTVEENLW 603

  Fly   117 MAATLKISNQCVSLKEKRTLIDYLLNSLKLTKTRQT-----KCSNLSGGQKKRLSIALELIDNPA 176
            ..|..::... :|..:|..:::.:::||.|...|.:     :...:||||:||:::.||::..|:
plant   604 FHAKCRLPAD-LSKADKVLVVERIIDSLGLQAVRSSLVGTVEKRGISGGQRKRVNVGLEMVMEPS 667

  Fly   177 VLFLDEPTTGLDSSSSFDTIQLLRGLANEGRTIVCTIHQPSTNIYNLFN-LVYVLSAGRCTYQGT 240
            ||||||||:||||:||...::.||..|.||..|...:||||..::..|| ||.:...|...|.|:
plant   668 VLFLDEPTSGLDSASSQLLLRALRHEALEGVNICMVVHQPSYTLFKTFNDLVLLAKGGLTVYHGS 732

  Fly   241 PQNTVMFLSSVGLECPPYHNPADFLLECANG---DYGDQTEALAEAAKDIRWR----YDQQLMQG 298
            ......:.|.:|:..|...||.|:.::...|   ..|:......|..:  ||.    |...|...
plant   733 VNKVEEYFSGLGIHVPDRINPPDYYIDVLEGVVISMGNSGIGYKELPQ--RWMLHKGYSVPLDMR 795

  Fly   299 EDADAPSETQV-----AKFNESQS---------PGQVQVQVQKIEIQNMESSKDLTKHTYPPTEY 349
            .::.|..||..     :..|..|:         ....:::..||. .|...|:||: |...|:.:
plant   796 NNSAAGLETNPDLGTNSPDNAEQTFARELWRDVKSNFRLRRDKIR-HNFLKSRDLS-HRRTPSTW 858

  Fly   350 MRLWLLIGRCHLQFFRDWTL---TYLKLGIHVLCSILIGLFFGDSGSNATKQISNVGMIMIHCVY 411
            ::....:||...|..|:..|   .||.|       :|.|...|.....:.:.....|.|      
plant   859 LQYKYFLGRIAKQRMREAQLQATDYLIL-------LLAGACLGSLIKASDESFGAPGYI------ 910

  Fly   412 LWYTTIMPGILRYPAEIEIIRKETFNNWYKLRTYYLATIITSTPVHIIFST-----------VYI 465
              ||.|...:|...|.:.....:..:.|.:     .|:.::|:...:...|           ||:
plant   911 --YTIIAVSLLCKIAALRSFSLDKLHYWRE-----SASGMSSSACFLAKDTIDIFNILVKPLVYL 968

  Fly   466 TIGYLMTD-QPVEMDRFVKYLLSAVVVTICADGLGVFLG-------TVLNPVNGTFVGAVSTSCM 522
            ::.|..|: :....|.::..:.....||..|..|.:||.       :||.||..|.|.....:..
plant   969 SMFYFFTNPRSTFFDNYIVLVCLVYCVTGIAYALAIFLQPSTAQLFSVLLPVVLTLVATQPKNSE 1033

  Fly   523 LMFSGFLILLNHIPAAMRFMAYISPLRYALENMVISLYGN 562
            |               :|.:|.:|..::|||..||   ||
plant  1034 L---------------IRIIADLSYPKWALEAFVI---GN 1055

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31689NP_001259954.1 3a01204 15..622 CDD:273361 164/611 (27%)
ABCG_EPDR 26..239 CDD:213180 84/226 (37%)
ABC2_membrane 355..558 CDD:279410 47/224 (21%)
ABCG24NP_175745.4 EcfA2 504..736 CDD:224047 85/236 (36%)
ABCG_EPDR 505..731 CDD:213180 84/230 (37%)
ABC2_membrane 867..>1006 CDD:304374 30/158 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1855
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.